- Transcript 'KH2012:KH.C6.219.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.219.v1.A.SL1-1
Possible name(s)
FLRT1; FLRT2; FLRT3
Gene model
Location
KhC6 [1,920,845 / 1,923,094]
Amino acid sequence
Length: 666
>KH.C6.219.v1.A.SL1-1
YITMKVVSILLILWWTVRLCFSLACPRECRCDMRRKIVFCNERGLKYVPYGIPTNTRVLH
LQGNVIVNSPTSEENLRRLSSLRKLDLHGNKLTSFPKKLPSSLEYISLQRNHLKYVGRDV
LSGLTRLTELHLDGNNITSAGISRSAFKNALSLQVLVMTGNLLTSLPLNLPPSIRFLRLD
KNRIDVVSSSAAKTLTSLSAIDLSHNRINTGLDEGAFSQLSSLRSLNLQANLLHSVPKYL
PTGLNELLLAKNKIKFIRSDATALNSLTELKKLDLSSNQIESVQVSAFDGLINLRSVELH
DNPWRCDCYLLYLKSWSSETAAIIGSQGNVRCYSPGAFQGVTLGSIDVETLSEQCAQTSG
NAISIQNIGTSSIGFEFTGFKAHDPDYLTYIAIYGKLLCSNCTVDTMNPLTKAVEVLEVT
SAKPVNSTQNQLSNLDADTRYVICVYTSYTSANDVTVSSCQEFRTAVNPVKENETGIRRK
SLPSWLVVTMSAVLFSTVVVIIMLIVWKVYTSRSTVTKSSYVTSHERYLPPQYVQPDVTY
PTTGNGVEIHTYSGNDVKRCCAGLSASTTTLDARPEFDVALLVRTHNTVRPNSHSDTDVA
STTQTGITEANGSIDSLTYAAATLPRRPTSQIYSHFHCDVTPRHNDSRYSWFGSPSTDLD
DTGVYV
Nucleotide sequence
Length: 2,249
>KH2012:KH.C6.219.v1.A.SL1-1
ATATATCACTATGAAAGTAGTGTCAATATTACTGATTTTGTGGTGGACTGTTAGGCTTTG
CTTTTCCTTGGCGTGCCCGCGAGAGTGCCGGTGCGACATGAGACGGAAAATAGTGTTCTG
TAATGAAAGGGGGCTAAAATATGTCCCGTATGGAATACCTACGAACACACGGGTGCTACA
CTTACAAGGAAATGTTATAGTAAACAGTCCAACTTCGGAAGAGAACTTAAGAAGACTCTC
AAGCCTCCGAAAGCTTGATTTGCATGGAAATAAATTAACCTCCTTTCCGAAAAAGCTTCC
TTCCAGTCTGGAGTATATTTCGCTTCAGCGAAACCACCTGAAATACGTAGGTCGTGACGT
ACTCTCCGGTTTGACACGCTTAACTGAGTTACACCTTGATGGAAACAACATTACTAGCGC
TGGGATTTCAAGAAGCGCGTTCAAAAACGCTCTCTCTTTGCAAGTTTTAGTGATGACCGG
TAACCTGTTGACGTCATTACCACTCAATCTGCCACCAAGTATTAGATTTCTTCGCTTGGA
TAAAAATCGTATCGACGTGGTTAGTAGTTCAGCGGCTAAAACTTTAACCAGTCTTTCAGC
GATCGACTTGTCTCATAATAGAATCAATACCGGTCTGGATGAAGGGGCATTTTCCCAACT
CTCAAGCCTAAGGTCGCTGAACCTGCAAGCCAATTTGCTGCACTCAGTGCCCAAGTACCT
ACCCACTGGCCTAAACGAACTACTGCTCGCTAAAAACAAAATTAAATTCATTCGATCGGA
TGCTACAGCCCTGAATAGCCTCACCGAGCTTAAGAAATTGGACCTTTCCTCAAACCAAAT
CGAAAGTGTGCAAGTCAGCGCTTTTGACGGTTTAATAAATTTGCGGTCTGTGGAGCTACA
TGATAACCCATGGCGATGCGACTGCTATCTTTTATATCTGAAATCCTGGTCTTCGGAAAC
AGCAGCCATCATTGGAAGCCAGGGTAATGTACGTTGTTACTCGCCTGGTGCATTTCAGGG
CGTTACATTGGGAAGTATTGACGTAGAAACTCTGTCAGAACAATGTGCACAAACCAGTGG
GAACGCTATTTCAATACAAAACATTGGCACAAGCAGTATTGGGTTCGAATTCACTGGTTT
CAAAGCGCACGATCCGGATTACTTAACCTATATAGCAATATACGGCAAACTACTGTGTTC
TAATTGCACAGTAGATACCATGAACCCCCTCACCAAAGCTGTAGAAGTATTAGAAGTAAC
GTCAGCCAAACCTGTCAACTCTACACAGAATCAGCTTTCCAATTTAGACGCTGACACTCG
TTACGTCATTTGCGTGTACACGTCATACACTTCTGCTAATGACGTCACGGTTTCGTCATG
CCAAGAATTCCGTACAGCAGTTAACCCAGTCAAAGAAAACGAAACCGGAATTAGACGTAA
AAGCTTACCATCGTGGCTCGTGGTTACAATGAGCGCTGTATTATTTTCAACTGTTGTCGT
CATAATCATGCTCATTGTTTGGAAAGTCTATACCTCGCGATCGACAGTGACGAAGTCAAG
TTACGTCACCAGCCACGAACGCTACTTACCCCCTCAATATGTGCAACCTGACGTCACATA
CCCTACGACCGGTAACGGTGTAGAGATACATACCTACAGCGGTAACGACGTGAAGAGGTG
CTGTGCAGGTTTATCTGCAAGTACTACAACATTGGACGCAAGGCCAGAGTTCGACGTCGC
TCTACTGGTGCGTACACATAACACGGTACGCCCGAACAGCCACAGCGACACTGACGTTGC
TTCTACAACCCAGACCGGTATAACAGAGGCAAACGGTTCAATTGATAGTTTGACGTACGC
GGCCGCGACGCTGCCAAGAAGGCCCACGTCACAAATATACTCTCACTTTCATTGTGACGT
CACGCCGCGTCACAATGACTCGCGATATTCGTGGTTTGGTTCGCCGTCAACGGACTTGGA
CGACACTGGAGTTTACGTATAACGCGACTTTTCAATTTCCTCTTTTTCCAATCTTCCTGT
TTAATTTTTTCATGCAATTACTCGAGCACTTGGTTCAGACTATACACGCTCTGCTCACTA
GTCATTACCATACATTATTAATGCTAGAACGAGCAGTGGCGAACTTTTGCGGGTCAAACC
ATGTTTTCCATTACCGTGGTCAAAGTGTGCGCATTCGTGTTATTTATTCCGCGTTTATTT
TATATGAATAAACCATGCTCCTTTTTAAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[23-358] 1.0E-76 |
| SMART |
LRRNT (IPR000372) - T[24-58] 2.0E-4 |
| Pfam |
LRRNT (IPR000372) - T[24-53] 4.8E-6 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[55-76] 4.809 - T[81-102] 7.604 - T[126-146] 5.925 - T[152-174] 5.656 - T[197-219] 5.717 - T[222-243] 6.565 - T[244-264] 5.202 - T[269-290] 7.404 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[79-102] 0.014 - T[124-149] 4.8 - T[152-173] 280.0 - T[195-219] 3.3 - T[220-243] 0.19 - T[267-290] 9.9E-4 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[80-137] 3.8E-10 - T[174-233] 1.5E-13 - T[243-302] 3.7E-8 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[302-356] 5.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FLRT1_HUMAN | 29.25 % | 194 | 1.45E-53 |
| FLRT2_HUMAN | 38.806 % | 221 | 2.62E-63 |
| FLRT3_HUMAN | 33.841 % | 190 | 4.33E-52 |