- Transcript 'KH2012:KH.C14.125.v2...' >
- Transcript 'KH2012:KH.C14.125.v1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C14.125.v3...' >
- Transcript 'KH2012:KH.C6.244.v2....'
Transcript Model
Transcript Id
KH2012:KH.C6.244.v2.A.SL1-1
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
KhC6 [356,822 / 359,148]
Amino acid sequence
Length: 161
>KH.C6.244.v2.A.SL1-1
SLPEELKNECTAAFEIFTKDSTDGKLGADELGKVMRMLGQSPSDDEVQEIIRDFAEGDTL
ALDEFLDFMAKQLNGGQDKREEDLSKEFKLLLKETFRWYDTDADGIISWSELKTALKNTG
EKIEDWEIDELMKDGDENMDKHIDFDEWINMMKELEGQIQC
Nucleotide sequence
Length: 686
>KH2012:KH.C6.244.v2.A.SL1-1
TCTCTTCCAGAAGAACTTAAGAACGAGTGCACCGCTGCGTTCGAAATATTCACCAAAGAT
TCTACCGATGGTAAACTGGGTGCTGATGAACTTGGAAAAGTCATGAGAATGTTAGGACAA
TCACCAAGCGACGATGAGGTCCAGGAAATCATCCGTGACTTTGCTGAAGGTGATACACTG
GCGTTGGATGAATTTCTTGATTTTATGGCAAAGCAGTTGAATGGTGGGCAAGACAAACGC
GAAGAAGATTTGAGCAAAGAATTTAAATTACTTCTGAAAGAAACCTTCCGTTGGTATGAC
ACTGACGCCGATGGTATTATCAGCTGGAGTGAACTTAAGACGGCGCTAAAGAACACTGGA
GAGAAAATCGAAGATTGGGAAATCGATGAACTCATGAAGGACGGAGATGAAAACATGGAT
AAACATATTGATTTTGATGAATGGATCAACATGATGAAGGAATTGGAAGGCCAAATACAA
TGCTAATGTTTCGCTGTAAATACCATGCATTTCACAGTGTTTTGCACAATTTTGTTTTGA
GTAATGTTCATTACAATAAACTTAAAACGTATACGTTTTATTGAACAATGCGTCAATAGA
TTTAAACTAATCTCAACGTGAACGAAAATATCAACAGAAATAAATAGTTGGAATGGTTAC
AAAATAAAACAAAACTTTAAAATAAA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[2-158] 2.66E-30 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[5-41] 7.372 - T[87-122] 11.919 - T[127-158] 9.66 |
| CDD |
EF_hand_dom (IPR002048) - T[9-70] 7.97465E-8 - T[92-153] 2.19454E-11 |
| SMART |
EF_hand_dom (IPR002048) - T[9-38] 22.0 - T[91-119] 0.5 - T[127-155] 0.028 |
| Pfam |
EF_hand_dom (IPR002048) - T[23-71] 0.012 - T[92-118] 1.3E-5 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[100-112] . - T[136-148] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 37.908 % | 95.9 | 6.62E-26 |
| TNNC1_HUMAN | 46.203 % | 117 | 5.15E-34 |
| TNNC2_HUMAN | 41.935 % | 103 | 1.31E-28 |