- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C6.50.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C6.50.v1.A.SL1-1
Possible name(s)
ADGRB2; HMCN1; THBS1
Gene model
Location
KhC6 [38,610 / 42,218]
Amino acid sequence
Length: 772
>KH.C6.50.v1.A.SL1-1
FKMVNVLVLCVVLGAFVTFSDSCNVNDFNQFNQSNPGPFVACLKDPCAADSEDVALVNCT
LYAHCILHENQCYAKYRTEAEYSPMTGILELVPNNGSLDERFFQLGGLGGGFTGTGCLPA
GLPGGLSNLPRCPVPCTGLPTNHPGLGGLGGLGGLAGHGGNAGGHGVLPFPPRCPSTFPA
TCNINAYQPNLLLPLLNPLVNVPYCLRIPCSSSNPCLERNRNACINVPGCYFDMGLANLR
QRYGNHIMPGVPVCHLAIRNRKFHQLVSSYLQTSGRPWNGIYTKCFINENRNHIYAPSPG
CYQIHVLKYIGVQPTLAGWPGITNNECYLIDGCPIDGVCYRPGQLTRVQVRSGEDTARHN
VQTGHNYFGQPRCLNYNPTTPQEYLDGYHQCRQAGCVVDPSITPNVLKQKLYQFALTLPV
LQQIPFWRGVLSGQIRADNYRQHTRQSACPNIVQPTIIAPYSLNLQGRNYIPLPNPSVSP
LNTQLPFSVGNPINLHNLLNPGIIRPQCPYQSFQNLLTGSTAGCCQRNLCYTPRSSILRS
ASGVAAYQAEWGEYSACTVSCGGGTRKRSRPCVTYRHNDTCVQGLAEETHRCNVGACPQF
GNWGGFGSCSVTCGGGTQTRTRPCLPEGSTCSDDAQGGASQSRLCNQIACPTYSAWSQWG
DCNVQCGVGEKTRTRTCTSPPGAAPCNSALLISTESCATSCGTCQRTEGACQPYNKCYKE
ITTRCVPDAQGGAYCPNCPNHTVKVRCVPTIGWNDYCRHCHNALVQCLPLSP
Nucleotide sequence
Length: 2,406
>KH2012:KH.C6.50.v1.A.SL1-1
TGTTTAAAATGGTTAATGTTCTAGTTTTGTGTGTTGTTCTTGGTGCCTTTGTGACGTTTT
CAGATTCTTGTAACGTCAATGATTTCAATCAATTCAATCAATCAAATCCTGGCCCTTTCG
TGGCCTGTTTAAAGGACCCGTGTGCTGCCGACAGTGAAGATGTGGCTTTGGTCAATTGCA
CCCTATACGCTCATTGCATCTTGCATGAAAATCAATGCTACGCAAAGTACAGAACGGAAG
CGGAATATTCTCCCATGACGGGAATACTTGAATTAGTACCCAATAACGGATCGCTCGATG
AAAGGTTTTTTCAACTAGGGGGATTAGGAGGAGGTTTCACAGGCACTGGCTGTTTACCGG
CTGGATTACCCGGTGGATTATCAAACCTGCCAAGATGTCCTGTACCGTGTACTGGCTTAC
CAACAAATCACCCTGGACTCGGAGGACTCGGAGGACTCGGCGGACTTGCGGGACATGGCG
GCAATGCTGGCGGACATGGCGTATTGCCTTTTCCACCACGATGTCCATCCACTTTCCCTG
CCACATGTAACATTAATGCATACCAGCCCAATTTGCTTTTACCATTGCTGAACCCACTAG
TAAACGTCCCTTATTGCTTGAGAATACCGTGTTCTTCAAGCAATCCATGTCTTGAAAGAA
ATAGAAACGCTTGCATCAATGTCCCTGGGTGTTATTTCGATATGGGTTTGGCCAATCTGC
GACAACGTTATGGCAATCACATTATGCCCGGTGTGCCAGTATGCCATCTTGCAATCAGAA
ACAGAAAGTTTCACCAATTGGTTAGCAGCTACCTTCAAACGAGTGGGCGACCATGGAATG
GAATTTACACTAAATGTTTCATAAACGAAAACCGAAACCACATTTATGCTCCATCTCCAG
GCTGCTATCAAATCCACGTGCTTAAATATATTGGCGTTCAACCTACACTTGCTGGATGGC
CAGGTATCACAAACAATGAATGCTACCTGATCGACGGGTGTCCAATAGATGGAGTGTGTT
ATCGACCCGGGCAGCTCACTAGAGTCCAAGTGAGATCTGGAGAAGACACAGCTCGGCATA
ATGTCCAAACTGGGCACAACTACTTCGGTCAACCTAGGTGTCTTAACTACAATCCAACAA
CACCACAAGAATACTTGGACGGTTATCATCAATGCAGACAAGCTGGTTGTGTGGTTGACC
CATCAATCACTCCAAATGTACTCAAACAAAAACTTTATCAGTTTGCTTTAACTTTACCTG
TTCTCCAACAAATACCTTTCTGGCGTGGTGTGTTAAGCGGCCAAATAAGAGCTGACAACT
ACAGACAGCATACGAGACAAAGTGCTTGTCCAAACATTGTGCAACCGACAATCATTGCAC
CATATTCGCTTAACCTACAGGGAAGAAATTATATCCCCTTGCCTAACCCCTCGGTCTCAC
CCCTGAACACACAGCTACCCTTCAGTGTGGGTAATCCTATCAACTTGCATAATCTGTTAA
ACCCAGGAATTATACGGCCACAGTGTCCTTACCAAAGTTTTCAGAACTTGTTAACAGGAA
GCACTGCCGGATGCTGTCAGAGAAACCTTTGCTACACCCCCAGGTCAAGCATCTTAAGGT
CGGCTTCAGGAGTTGCCGCTTATCAGGCTGAGTGGGGAGAATACAGCGCGTGTACTGTCA
GTTGTGGTGGTGGGACACGGAAGAGAAGCAGACCATGTGTGACCTACAGACACAACGACA
CATGCGTACAAGGATTGGCTGAAGAAACTCACCGATGCAATGTAGGTGCTTGTCCTCAGT
TTGGAAACTGGGGAGGGTTTGGTAGTTGCTCTGTTACTTGTGGAGGTGGAACACAAACCA
GAACCCGACCTTGCTTACCTGAAGGTAGCACCTGTTCAGATGACGCTCAAGGTGGAGCTT
CTCAATCACGACTTTGCAACCAAATTGCATGCCCAACCTATTCTGCTTGGAGTCAGTGGG
GAGATTGCAATGTTCAATGCGGCGTTGGGGAGAAAACACGGACACGAACATGTACATCAC
CACCTGGAGCCGCTCCCTGCAACTCAGCGCTTCTGATTTCAACAGAATCGTGTGCAACAA
GTTGTGGGACGTGTCAACGAACGGAAGGCGCATGTCAACCATATAACAAATGCTACAAGG
AAATCACAACACGATGCGTACCAGATGCCCAAGGAGGAGCTTACTGTCCTAACTGTCCTA
ACCATACCGTTAAAGTACGATGTGTCCCAACCATTGGTTGGAATGATTACTGCAGGCATT
GCCATAATGCCTTAGTTCAGTGTCTTCCTTTAAGCCCATGAACAACGCAAGCATTTATCA
CCTGAATAGTTTATTGTTTCAATGAACTTTTGACATGTTTAATTCAAATAAACGCATTTT
AAACTA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[545-597] 2.8E-10 - T[598-653] 1.8E-9 - T[654-704] 4.6E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[545-596] 10.575 - T[597-651] 11.935 - T[653-702] 9.88 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[546-597] 4.58E-10 - T[599-650] 1.96E-8 - T[650-697] 9.94E-9 |
| SMART |
TSP1_rpt (IPR000884) - T[548-598] 6.3E-8 - T[600-651] 6.5E-11 - T[653-702] 1.9E-7 |
| Pfam |
TSP1_rpt (IPR000884) - T[550-597] 3.9E-7 - T[601-650] 9.9E-7 - T[654-697] 2.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 39.333 % | 93.6 | 2.88E-19 |
| AGRB2_HUMAN | 36.232 % | 90.9 | 1.6E-18 |