Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C6.56.v1.A.ND3-3

Possible name(s)

RAB10; RAB8A; RAB8B

Gene model

KH2012:KH.C6.56

Location

KhC6 [2,016,673 / 2,017,477]

Sequences

Amino acid sequence

Length: 95

>KH.C6.56.v1.A.ND3-3
LDRTEMAASGGKTYDYLFKLLLIGDSGVGKTCVLFRFSEDHFNSTFISTIGIDFKIRTID
LDGKKVKLQIWYVETCYTFAKIDSLQKLHNRLCGC

Nucleotide sequence

Length: 643

>KH2012:KH.C6.56.v1.A.ND3-3
TTTAAGTATCCAAAACTTTCTTTAAACTTGTAAAAACATCTTTTAAACGGATTTGAAACC
ACTATACGAAAAAGTTCAACTTTGGCAAAAAAACTGCAAGTTTTAAGACCTATTCTGTTG
GAATAGACATTTTAGTTAGATAGAACTGAAATGGCGGCCAGCGGTGGGAAAACGTATGAC
TACCTGTTCAAGTTATTGCTTATTGGTGACAGTGGAGTTGGAAAAACCTGCGTTTTGTTT
CGTTTTTCAGAAGACCACTTCAATTCAACGTTTATTTCCACCATAGGCATTGATTTCAAA
ATAAGGACAATAGACTTGGATGGAAAGAAAGTCAAACTTCAAATATGGTATGTGGAAACT
TGTTATACTTTTGCAAAAATAGACAGTCTTCAGAAGCTGCACAATCGATTATGTGGATGC
TAAATTTTTGAAGATGCCACTCAATTAAGGTTACAATGCAGAAAATCTTCCCTAATTATC
TTAATAGTTTAAATCAATGTGGAAATGGCTATACTTTTATGTTTATGTGATTTTTTTGCC
ACAAATCACTAATGTATGAAAGCATTTGACTTTGTGGATGTGGAATTTTGATAATGTTTG
CCAATTAATGTTACATCAGAAAAACCTTTGTCAATGTGCTTGA

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[13-72] 5.64E-19
Pfam	Small_GTPase (IPR001806) - T[19-71] 6.2E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAB8B_HUMAN	90.164 %	117	1.05E-34
RAB8A_HUMAN	91.803 %	119	2.97E-35
RAB10_HUMAN	85 %	108	3.17E-31