Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C6.56.v2.A.SL2-2

Possible name(s)

RAB10; RAB8A; RAB8B

Gene model

KH2012:KH.C6.56

Location

KhC6 [2,016,657 / 2,018,033]

Sequences

Amino acid sequence

Length: 95

>KH.C6.56.v2.A.SL2-2
LDRTEMAASGGKTYDYLFKLLLIGDSGVGKTCVLFRFSEDHFNSTFISTIGIDFKIRTID
LDGKKVKLQIWYVETCYTFAKIDSLQKLHNRLCGC

Nucleotide sequence

Length: 645

>KH2012:KH.C6.56.v2.A.SL2-2
ATGATCGGATAGTAACTTTAAGTATCCAAAACTTTCTTTAAACTTGTAAAAACATCTTTT
AAACGGATTTGAAACCACTATACGAAAAAGTTCAACTTTGGCAAAAAAACTGCAAGTTTT
AAGACCTATTCTGTTGGAATAGACATTTTAGTTAGATAGAACTGAAATGGCGGCCAGCGG
TGGGAAAACGTATGACTACCTGTTCAAGTTATTGCTTATTGGTGACAGTGGAGTTGGAAA
AACCTGCGTTTTGTTTCGTTTTTCAGAAGACCACTTCAATTCAACGTTTATTTCCACCAT
AGGCATTGATTTCAAAATAAGGACAATAGACTTGGATGGAAAGAAAGTCAAACTTCAAAT
ATGGTATGTGGAAACTTGTTATACTTTTGCAAAAATAGACAGTCTTCAGAAGCTGCACAA
TCGATTATGTGGATGCTAAATTTTTGAAGATGCCACTCAATTAAGGGATACTGCAGGGCA
GGAAAGATTTCGAACAATTACTACTGCATATTATAGAGGGGCGATGGGCATTATGCTTGT
GTATGACATCACAAATGATAAGTCATTTGAAAATATAAAGAACTGGATTAGAAACATTGA
AGAGCATGCATCTTCTGACGTTAAAAGATGATTTAGGAAATAAAT

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[13-72] 5.64E-19
Pfam	Small_GTPase (IPR001806) - T[19-71] 6.2E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAB8B_HUMAN	90.164 %	117	1.05E-34
RAB8A_HUMAN	91.803 %	119	2.97E-35
RAB10_HUMAN	85 %	108	3.17E-31