- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Molecular Tool 'Hr-FoxDa MO (Kumano 2006)' >
- Transcript 'KH2012:KH.C6.71.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C6.71.v1.A.ND2-1
Possible name(s)
LEF1; TCF7; TCF7L2
Gene model
Location
KhC6 [117,207 / 125,212]
Amino acid sequence
Length: 600
>KH.C6.71.v1.A.ND2-1
SPNSCNQERIIRISQRPKPISRQLWNIKHKVLNNIRNFLLQSQVPYNPYAYHHFLYGTPS
PTDIDGKPGLPRHNDVPAMYPLPGQLGQIPNPLSPWGPTSPTPFICTASAMAGMLRYPYP
FASQFTSTSGGMSAITPFPLVPPHVSGMHSTMIPHPAMALPGHLPNGHNQSKGGVDKKNF
GPEPGSKKREKGDKPSRPYVKKPLNAFMLYMKEQRAKVVAECTLKESAAINQILGRKWHS
LNREEQQKYYEMARKERQLHQQMFPGWSARDNYGKRKKRKKEKTQDCTAQNPKKCRAVFG
LEQQQLWCAPCRRKKKCIRYQHDDDDDDSDDDSDSIHYQPSPTDNGGGPPSNFDDPSMTS
LSTSSVISSNNGGQSTSSVVGDRFSPNRGHVEIPCDLIKQEKSPPLSHDNVNKQAHKSAR
DMYQPSSSYEPSPTDSNHSADRHNCAKRPRTTEPSVASTKSFTDVQSRHLQSGNTAGKTQ
TELRNRRSNSFGNSPMPHSHPNNSNNLFSPTVLSPGRSPIGGLNSPHSNNFFPHFQPYLQ
MSTLAALPPSPLNSFMGLPGFKGLQSPMSLSGAATTANPGGGHPGTNSTRRATSALEGKS
Nucleotide sequence
Length: 2,523
>KH2012:KH.C6.71.v1.A.ND2-1
TACAGTTCTGTAATGCAATCTGTTATATGAAGCTATTTTACTTCTGTAATCACCTAACTT
ATTGCACATGGGACCATTACTCATATATATGAACTCTAGCTCTTTGGTTGGTTATAACAT
ATGGAGTTGAAGAGTATTTCTCCATACCCCCATAGCAATAACTGCCTGAAGATAATATTT
AAAGTAAATTAAACTTGTGATCCCCTAACAGTTGTAACCAAGAAAGGATAATTAGAATTT
CCCAAAGGCCCAAGCCAATTTCAAGACAGTTGTGGAATATTAAACATAAGGTTTTGAATA
ACATAAGAAACTTTTTATTACAGAGTCAAGTGCCTTATAACCCTTATGCATATCACCACT
TCTTGTATGGTACACCTTCCCCTACAGATATAGATGGGAAACCAGGTTTACCACGACATA
ATGATGTACCAGCTATGTACCCACTACCTGGTCAACTTGGTCAAATACCTAACCCACTTA
GTCCATGGGGACCAACTAGCCCAACACCATTCATATGTACTGCTAGTGCAATGGCTGGCA
TGTTGCGATATCCATATCCATTTGCATCACAATTTACATCAACTTCGGGTGGTATGAGTG
CTATAACACCTTTTCCACTGGTGCCCCCTCATGTTAGTGGCATGCATTCCACTATGATAC
CACACCCTGCCATGGCATTACCTGGGCATTTACCTAATGGCCACAACCAAAGTAAAGGGG
GTGTAGATAAAAAAAATTTTGGGCCTGAACCTGGCTCAAAGAAACGCGAAAAAGGCGACA
AACCAAGTCGGCCATATGTGAAGAAACCACTCAATGCATTCATGCTCTATATGAAGGAAC
AACGGGCAAAAGTGGTCGCTGAATGCACGCTGAAAGAAAGTGCGGCAATCAACCAAATAC
TTGGAAGAAAGTGGCACAGTCTTAACCGTGAAGAGCAACAAAAATATTACGAGATGGCTC
GAAAAGAACGTCAACTTCACCAACAGATGTTTCCAGGTTGGAGTGCCAGAGATAATTATG
GTAAAAGAAAGAAAAGAAAAAAGGAAAAAACTCAAGATTGCACAGCTCAGAACCCCAAGA
AATGCCGAGCTGTGTTTGGTCTAGAACAACAGCAATTATGGTGCGCACCGTGCAGGAGGA
AAAAGAAATGCATAAGATACCAACATGATGACGACGATGACGATTCAGATGACGATTCGG
ATTCAATTCATTACCAGCCCTCCCCGACCGACAACGGTGGCGGTCCCCCCTCAAACTTCG
ACGACCCCTCTATGACGTCACTATCGACCTCCAGCGTCATAAGCAGCAACAATGGCGGAC
AATCAACTTCGTCTGTAGTAGGGGACCGTTTCTCACCTAACAGGGGGCATGTGGAAATAC
CTTGTGATTTAATAAAACAAGAAAAGTCGCCACCTTTATCGCATGATAATGTTAACAAGC
AGGCCCACAAATCAGCGAGAGACATGTACCAACCATCAAGTAGCTACGAACCTTCCCCTA
CCGACAGCAACCATAGTGCTGATAGACACAACTGTGCAAAGAGACCTCGAACCACAGAAC
CCAGTGTTGCCAGCACAAAATCTTTTACCGACGTCCAATCGCGACATCTTCAATCCGGCA
ACACTGCAGGAAAAACTCAAACCGAATTGCGTAACCGGCGATCGAACTCGTTCGGGAATT
CCCCGATGCCCCATAGTCACCCCAACAATAGCAATAACCTATTCTCACCCACCGTACTTT
CCCCCGGCCGTTCACCCATTGGGGGTCTGAATTCACCCCACTCAAACAACTTTTTCCCCC
ACTTTCAACCGTACCTGCAAATGAGTACACTTGCCGCTTTACCGCCGTCCCCATTGAACA
GTTTCATGGGGCTACCCGGTTTCAAAGGCTTACAGTCACCCATGAGTCTAAGTGGGGCAG
CAACGACTGCTAACCCCGGTGGGGGGCACCCAGGTACAAATTCCACCCGCCGTGCAACAT
CAGCATTAGAAGGAAAATCCTGAAATCTCAGTCGTTTTTTCCGAGATTCCTCCAAAAACG
TAGCGTTGCCAAACACGCAGCATTCTTCAAGTGGGATAAAAAGAGGGCGTGTCCGGCTTG
ATGACGTCATTTGTTGTGACGTCACTTGTGATGACGTCACGTCCAAGTTTTGTGTAGCGA
CCTTTGCGTGGTGCCAACACCGCATGAATTGCCAACCATACCTTACTCGTGCCTCGGATT
TTTTACGACGTTTAAATCATGTTTTTTTTTTTATCTTTTCTCTCGTGGAGCATATTATTA
TAAAACCATCGCAATTTTACTTTTAGCGCAGTGAATATTCGTTCTCAACTTTTTCTTTTC
ATTTCATTTCGAACTTGTCTTTTTAAACCCGAGATTGCGGACGGGCGTTTACTTTTCCGT
ACCGTTGCTGCTTTGTTTTGACAACTTTTTTGACTCCGGACACGTGAAAGTAATGTCACG
CATCGTTTTTACTGTTTTTTTTTTACCACGTGGCCTTTTATTCGTATTGAACAATCCAAC
AGT
| PANTHER |
TCF/LEF (IPR024940) - T[43-436] 1.6E-108 |
| SUPERFAMILY |
HMG_box_dom_sf (IPR036910) - T[185-267] 4.97E-20 |
| Gene3D |
HMG_box_dom_sf (IPR036910) - T[199-283] 3.5E-23 |
| SMART |
HMG_box_dom (IPR009071) - T[199-269] 2.4E-19 |
| Pfam |
HMG_box_dom (IPR009071) - T[200-267] 2.2E-21 |
| ProSiteProfiles |
HMG_box_dom (IPR009071) - T[200-268] 15.987 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TF7L2_HUMAN | 45.238 % | 228 | 1.25E-66 |
| LEF1_HUMAN | 48.679 % | 188 | 7.78E-54 |
| TF7L1_HUMAN | 45.946 % | 181 | 7.64E-50 |