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  1. Transcript 'KH2012:KH.C6.85.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C6.85.v1.A.SL1-1

Possible name(s)

CCT4; CCT5; HSPD1

Location

KhC6 [576,071 / 581,608]

Sequences

Amino acid sequence

Length: 579

>KH.C6.85.v1.A.SL1-1
LSTKLRTMHRFAKLVSKSAVPAGRIISRGYAKELKFGSMAREEMIAGVNQLADAVAVTMG
PKGRNVVLEQSWGSPKVTKDGVTVAKGIEFKDKFKNIGAKLVQDVANSTNEEAGDGTTTA
TVLARAIAREGAEKISRGTNPIEMRRGIQKAVDVVIEELKKMSKQVTTPEEIAQVATISA
NGDKEIGDLISNAMERVGRNGVITVKDGKTLHDELEVIEGMKFDRGYISPYFINSSKGQK
VEFQNAYVLLSEKKISSIQSIVPALELANSQRKPLVIIAEDVDGEALSTLVINRLKVGLQ
IAAVKAPGFGDNRKNTLKDMAIATGGLVFGEDALELKLEDVQAHDLGEVEEITITKDDCL
LLRGKGKQEDVEKRVAQIHEQIDETSSDYEREKLNERVAKLASGVAVLKVGGSSEVEVNE
KKDRVNDALNATRAAVEEGIVPGGGVALLRCHDIISALQGGTRDEQVGVDIILKVLRIPC
AQIADNAGMEGQLVAEKLLQHKGDYGYDAREDKYRNMLEAGILDPTKVVKQALIDASGVA
SLLTTAECVVTEEPKEDPPMPAGGGMGGMGGMGGMGGMM

Nucleotide sequence

Length: 2,703

>KH2012:KH.C6.85.v1.A.SL1-1
AGCACAGTAGCAGAGCAGTGCGTTTTGAATTTGAATCTATCTTTTGTATAACTATCCACA
AAACTTCGCACGATGCACCGATTTGCAAAACTTGTGAGCAAATCTGCAGTTCCTGCTGGC
AGAATAATATCCAGGGGTTATGCAAAAGAACTAAAGTTTGGCTCCATGGCAAGAGAAGAA
ATGATTGCGGGCGTGAATCAGTTAGCTGATGCAGTCGCTGTCACTATGGGACCCAAAGGT
AGAAATGTAGTGTTGGAGCAATCTTGGGGGTCACCCAAGGTCACAAAAGATGGTGTTACC
GTCGCAAAAGGCATCGAATTCAAAGACAAATTCAAAAACATTGGCGCCAAGCTTGTACAA
GATGTAGCTAATAGCACAAATGAAGAAGCAGGCGATGGTACAACTACTGCTACTGTTCTT
GCCAGAGCTATTGCTAGAGAAGGAGCAGAAAAAATCAGCAGAGGCACAAACCCAATCGAA
ATGCGCCGCGGCATCCAAAAGGCCGTTGACGTTGTCATCGAGGAGTTAAAGAAGATGTCA
AAGCAAGTTACAACTCCTGAAGAGATTGCGCAAGTTGCTACAATCTCCGCAAATGGGGAT
AAAGAAATTGGCGACCTAATTTCTAATGCTATGGAAAGGGTTGGGCGAAATGGAGTTATA
ACTGTAAAAGATGGCAAGACACTTCACGACGAGCTGGAAGTTATTGAAGGAATGAAATTT
GATCGTGGTTACATTTCTCCATACTTTATTAACTCGTCCAAAGGCCAAAAGGTTGAATTT
CAAAACGCTTATGTTCTGCTTTCGGAAAAGAAGATTAGTTCAATACAGTCAATTGTCCCA
GCCCTTGAGCTTGCCAACTCCCAGCGTAAACCACTCGTGATTATCGCTGAGGACGTTGAT
GGTGAGGCATTGAGCACTCTGGTCATCAACAGACTGAAAGTTGGTCTTCAAATTGCTGCA
GTGAAAGCACCAGGTTTTGGTGACAATAGAAAAAACACATTGAAAGACATGGCTATTGCA
ACTGGTGGTCTTGTGTTTGGTGAAGATGCTTTGGAACTTAAACTTGAAGATGTACAAGCC
CATGACCTTGGGGAGGTTGAAGAAATCACGATCACGAAAGACGATTGTCTCCTTCTACGA
GGTAAAGGTAAGCAAGAAGACGTAGAAAAGAGAGTCGCGCAAATCCACGAACAAATTGAT
GAAACCAGTAGCGATTATGAGAGGGAAAAACTGAATGAAAGAGTTGCAAAACTTGCGAGT
GGTGTTGCTGTGTTGAAGGTAGGTGGCAGTAGTGAGGTGGAAGTTAACGAGAAGAAAGAT
CGAGTTAATGACGCATTGAACGCAACACGAGCTGCAGTAGAAGAAGGCATCGTCCCAGGT
GGTGGCGTCGCTCTTCTAAGGTGTCATGACATTATCTCTGCTCTACAAGGGGGTACAAGA
GACGAACAAGTTGGGGTTGACATTATTCTCAAAGTTTTAAGAATACCTTGCGCCCAAATA
GCTGACAACGCTGGCATGGAGGGACAACTTGTAGCTGAGAAACTGTTGCAGCATAAAGGT
GACTATGGCTACGACGCACGAGAAGACAAATACCGTAACATGCTCGAAGCTGGAATTCTG
GACCCAACGAAAGTCGTAAAACAGGCTCTTATTGATGCTTCTGGTGTTGCTTCGTTGCTT
ACAACTGCTGAGTGTGTTGTTACCGAAGAACCAAAGGAAGACCCCCCAATGCCTGCAGGA
GGGGGTATGGGTGGCATGGGAGGAATGGGTGGCATGGGTGGAATGATGTAACAAGACCAA
TTTGACGTATAAAAAAATTTCAACAATTTTTGGAAATTTTATGAAAATGACCACTCATTT
CAGCAAAAAATTTTGGGAATTTTTTCAACATTCAAAAAAGGTTGTTTTTTGGAAGAAAGT
GTAAACAAATATGTGGAAATTTTTAGCTAAATTAAGGGGTAACAAATGTGTGAACATTTT
TTGATAATTCTTACACATTTCAACGTTCAAAAAGGGATAATTTTTGGCAGAAATTTCAAT
TTTTTTGTGAAATTCTTTTAGTAGCAAGACTCAAAGAGTGTATAGCAGTTATAATACAAT
CTTTACACTTTCTTATTTTCTTAACGTATTAATCGTACTGTTGCGTAATTCCTGCCACAA
ACTCAATGGATCAAATCGTGAAAGATGAGAATTTCACTTTTTCTGCTTCTTAAAGCGTAC
ACTCCAAAATCGAGTGCTCATTTAAATAAATACAACGTTTTTTCAATGTGTGGCTTATTT
ATTTTAATTCCACATGGCAAAAATCTTTTTTTCTGCTGCTAAATCTAAGACTTAAAATCG
GGTGCTCATTTAAATAAATACAACGTTTTTCAATATATGGTTTATTTAATCTAATTTGAC
AAAACGACATTAAAATAATAGGCATAGGCGACAAATCTGGGGTGGCAAGGTAGGCAAGTT
AGCCCTGGAATTTTTGCACCGTTTAAAACCATAAAAATACGACCAATTAGATAAAATTTG
TTCCCAAGGGCTTTGTATCCTATTCCTGCATCCCCTGCATTTTAAAAGATTTGGCGCCTA
TGATTTAGGCACTACATGATAAGGATATGAATAGCTAAAGGACGACATTCTACTCTAAAA
TTTATTTTGTTGGAAATAACTTAATGCCAGAATTCGCCATGGTATGACGTAATAATATGC
TGA

InterProScan

PANTHER
Cpn60/TCP-1 (IPR002423) - T[22-566] 7.0E-255
Hamap
Chaprnin_Cpn60 (IPR001844) - T[30-575] 36.133
TIGRFAM
Chaprnin_Cpn60 (IPR001844) - T[31-556] 4.9E-218
CDD
Chaprnin_Cpn60 (IPR001844) - T[32-552] 0.0
Gene3D
GROEL-like_equatorial_sf (IPR027413) - T[35-164] 5.8E-230 - T[440-550] 5.8E-230
SUPERFAMILY
GROEL-like_equatorial_sf (IPR027413) - T[35-162] 2.42E-71 - T[435-550] 2.42E-71
Pfam
Cpn60/TCP-1 (IPR002423) - T[51-552] 2.7E-84
PRINTS
Chaprnin_Cpn60 (IPR001844) - T[55-81] 2.7E-67 - T[111-138] 2.7E-67 - T[296-319] 2.7E-67 - T[379-404] 2.7E-67 - T[427-448] 2.7E-67
Gene3D
TCP-1-like_intermed_sf (IPR027410) - T[165-219] 5.8E-230 - T[403-439] 5.8E-230
SUPERFAMILY
TCP-1-like_intermed_sf (IPR027410) - T[166-231] 2.01E-25
SUPERFAMILY
GroEL-like_apical_dom_sf (IPR027409) - T[212-405] 2.88E-73
Gene3D
GroEL-like_apical_dom_sf (IPR027409) - T[220-402] 5.8E-230
ProSitePatterns
Chaperonin_Cpn60_CS (IPR018370) - T[434-445] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CH60_HUMAN 71.813 % 800 0