- Transcript 'KH2012:KH.C8.71.v1.A...' >
- Transcript 'KH2012:KH.C6.85.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C6.85.v1.A.SL1-1
Possible name(s)
CCT4; CCT5; HSPD1
Gene model
Location
KhC6 [576,071 / 581,608]
Amino acid sequence
Length: 579
>KH.C6.85.v1.A.SL1-1
LSTKLRTMHRFAKLVSKSAVPAGRIISRGYAKELKFGSMAREEMIAGVNQLADAVAVTMG
PKGRNVVLEQSWGSPKVTKDGVTVAKGIEFKDKFKNIGAKLVQDVANSTNEEAGDGTTTA
TVLARAIAREGAEKISRGTNPIEMRRGIQKAVDVVIEELKKMSKQVTTPEEIAQVATISA
NGDKEIGDLISNAMERVGRNGVITVKDGKTLHDELEVIEGMKFDRGYISPYFINSSKGQK
VEFQNAYVLLSEKKISSIQSIVPALELANSQRKPLVIIAEDVDGEALSTLVINRLKVGLQ
IAAVKAPGFGDNRKNTLKDMAIATGGLVFGEDALELKLEDVQAHDLGEVEEITITKDDCL
LLRGKGKQEDVEKRVAQIHEQIDETSSDYEREKLNERVAKLASGVAVLKVGGSSEVEVNE
KKDRVNDALNATRAAVEEGIVPGGGVALLRCHDIISALQGGTRDEQVGVDIILKVLRIPC
AQIADNAGMEGQLVAEKLLQHKGDYGYDAREDKYRNMLEAGILDPTKVVKQALIDASGVA
SLLTTAECVVTEEPKEDPPMPAGGGMGGMGGMGGMGGMM
Nucleotide sequence
Length: 2,703
>KH2012:KH.C6.85.v1.A.SL1-1
AGCACAGTAGCAGAGCAGTGCGTTTTGAATTTGAATCTATCTTTTGTATAACTATCCACA
AAACTTCGCACGATGCACCGATTTGCAAAACTTGTGAGCAAATCTGCAGTTCCTGCTGGC
AGAATAATATCCAGGGGTTATGCAAAAGAACTAAAGTTTGGCTCCATGGCAAGAGAAGAA
ATGATTGCGGGCGTGAATCAGTTAGCTGATGCAGTCGCTGTCACTATGGGACCCAAAGGT
AGAAATGTAGTGTTGGAGCAATCTTGGGGGTCACCCAAGGTCACAAAAGATGGTGTTACC
GTCGCAAAAGGCATCGAATTCAAAGACAAATTCAAAAACATTGGCGCCAAGCTTGTACAA
GATGTAGCTAATAGCACAAATGAAGAAGCAGGCGATGGTACAACTACTGCTACTGTTCTT
GCCAGAGCTATTGCTAGAGAAGGAGCAGAAAAAATCAGCAGAGGCACAAACCCAATCGAA
ATGCGCCGCGGCATCCAAAAGGCCGTTGACGTTGTCATCGAGGAGTTAAAGAAGATGTCA
AAGCAAGTTACAACTCCTGAAGAGATTGCGCAAGTTGCTACAATCTCCGCAAATGGGGAT
AAAGAAATTGGCGACCTAATTTCTAATGCTATGGAAAGGGTTGGGCGAAATGGAGTTATA
ACTGTAAAAGATGGCAAGACACTTCACGACGAGCTGGAAGTTATTGAAGGAATGAAATTT
GATCGTGGTTACATTTCTCCATACTTTATTAACTCGTCCAAAGGCCAAAAGGTTGAATTT
CAAAACGCTTATGTTCTGCTTTCGGAAAAGAAGATTAGTTCAATACAGTCAATTGTCCCA
GCCCTTGAGCTTGCCAACTCCCAGCGTAAACCACTCGTGATTATCGCTGAGGACGTTGAT
GGTGAGGCATTGAGCACTCTGGTCATCAACAGACTGAAAGTTGGTCTTCAAATTGCTGCA
GTGAAAGCACCAGGTTTTGGTGACAATAGAAAAAACACATTGAAAGACATGGCTATTGCA
ACTGGTGGTCTTGTGTTTGGTGAAGATGCTTTGGAACTTAAACTTGAAGATGTACAAGCC
CATGACCTTGGGGAGGTTGAAGAAATCACGATCACGAAAGACGATTGTCTCCTTCTACGA
GGTAAAGGTAAGCAAGAAGACGTAGAAAAGAGAGTCGCGCAAATCCACGAACAAATTGAT
GAAACCAGTAGCGATTATGAGAGGGAAAAACTGAATGAAAGAGTTGCAAAACTTGCGAGT
GGTGTTGCTGTGTTGAAGGTAGGTGGCAGTAGTGAGGTGGAAGTTAACGAGAAGAAAGAT
CGAGTTAATGACGCATTGAACGCAACACGAGCTGCAGTAGAAGAAGGCATCGTCCCAGGT
GGTGGCGTCGCTCTTCTAAGGTGTCATGACATTATCTCTGCTCTACAAGGGGGTACAAGA
GACGAACAAGTTGGGGTTGACATTATTCTCAAAGTTTTAAGAATACCTTGCGCCCAAATA
GCTGACAACGCTGGCATGGAGGGACAACTTGTAGCTGAGAAACTGTTGCAGCATAAAGGT
GACTATGGCTACGACGCACGAGAAGACAAATACCGTAACATGCTCGAAGCTGGAATTCTG
GACCCAACGAAAGTCGTAAAACAGGCTCTTATTGATGCTTCTGGTGTTGCTTCGTTGCTT
ACAACTGCTGAGTGTGTTGTTACCGAAGAACCAAAGGAAGACCCCCCAATGCCTGCAGGA
GGGGGTATGGGTGGCATGGGAGGAATGGGTGGCATGGGTGGAATGATGTAACAAGACCAA
TTTGACGTATAAAAAAATTTCAACAATTTTTGGAAATTTTATGAAAATGACCACTCATTT
CAGCAAAAAATTTTGGGAATTTTTTCAACATTCAAAAAAGGTTGTTTTTTGGAAGAAAGT
GTAAACAAATATGTGGAAATTTTTAGCTAAATTAAGGGGTAACAAATGTGTGAACATTTT
TTGATAATTCTTACACATTTCAACGTTCAAAAAGGGATAATTTTTGGCAGAAATTTCAAT
TTTTTTGTGAAATTCTTTTAGTAGCAAGACTCAAAGAGTGTATAGCAGTTATAATACAAT
CTTTACACTTTCTTATTTTCTTAACGTATTAATCGTACTGTTGCGTAATTCCTGCCACAA
ACTCAATGGATCAAATCGTGAAAGATGAGAATTTCACTTTTTCTGCTTCTTAAAGCGTAC
ACTCCAAAATCGAGTGCTCATTTAAATAAATACAACGTTTTTTCAATGTGTGGCTTATTT
ATTTTAATTCCACATGGCAAAAATCTTTTTTTCTGCTGCTAAATCTAAGACTTAAAATCG
GGTGCTCATTTAAATAAATACAACGTTTTTCAATATATGGTTTATTTAATCTAATTTGAC
AAAACGACATTAAAATAATAGGCATAGGCGACAAATCTGGGGTGGCAAGGTAGGCAAGTT
AGCCCTGGAATTTTTGCACCGTTTAAAACCATAAAAATACGACCAATTAGATAAAATTTG
TTCCCAAGGGCTTTGTATCCTATTCCTGCATCCCCTGCATTTTAAAAGATTTGGCGCCTA
TGATTTAGGCACTACATGATAAGGATATGAATAGCTAAAGGACGACATTCTACTCTAAAA
TTTATTTTGTTGGAAATAACTTAATGCCAGAATTCGCCATGGTATGACGTAATAATATGC
TGA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[22-566] 7.0E-255 |
| Hamap |
Chaprnin_Cpn60 (IPR001844) - T[30-575] 36.133 |
| TIGRFAM |
Chaprnin_Cpn60 (IPR001844) - T[31-556] 4.9E-218 |
| CDD |
Chaprnin_Cpn60 (IPR001844) - T[32-552] 0.0 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[35-164] 5.8E-230 - T[440-550] 5.8E-230 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[35-162] 2.42E-71 - T[435-550] 2.42E-71 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[51-552] 2.7E-84 |
| PRINTS |
Chaprnin_Cpn60 (IPR001844) - T[55-81] 2.7E-67 - T[111-138] 2.7E-67 - T[296-319] 2.7E-67 - T[379-404] 2.7E-67 - T[427-448] 2.7E-67 |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[165-219] 5.8E-230 - T[403-439] 5.8E-230 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[166-231] 2.01E-25 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[212-405] 2.88E-73 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[220-402] 5.8E-230 |
| ProSitePatterns |
Chaperonin_Cpn60_CS (IPR018370) - T[434-445] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CH60_HUMAN | 71.813 % | 800 | 0 |