- Transcript 'KH2012:KH.C1.394.v1....' >
- Transcript 'KH2012:KH.C2.70.v1.A...' >
- Molecular Tool 'MyoD-MO (Imai's 25mer MO)' >
- Transcript 'KH2012:KH.C7.190.v3....'
Transcript Model
Transcript Id
KH2012:KH.C7.190.v3.A.nonSL13-1
Possible name(s)
TPT1
Gene model
Location
KhC7 [5,540,304 / 5,543,298]
Amino acid sequence
Length: 172
>KH.C7.190.v3.A.nonSL13-1
NKMLIFKDIITGDELFTDAQKYEEFMGAFYKVYGKTTTRNDDLDPSLFGANPSAEDGDSG
AAESSSTQVIDFVDACKLVEAPAYDKKTFMAYFKDYCKHVAEKLTQEGRTDDVTEFKKHA
TDAMKYIKGNIKAFQIFTGESVDPDGSVGYLDWEDNVPYILFFKHALVEEKV
Nucleotide sequence
Length: 610
>KH2012:KH.C7.190.v3.A.nonSL13-1
AAACAAAATGCTGATTTTCAAAGATATAATTACCGGGGACGAACTGTTCACCGACGCACA
AAAGTATGAAGAGTTTATGGGCGCCTTTTATAAAGTATATGGCAAGACAACCACACGAAA
TGACGACTTAGACCCTTCTTTGTTCGGAGCAAATCCATCAGCAGAGGATGGGGATAGCGG
GGCTGCCGAAAGTTCATCAACTCAAGTCATCGATTTTGTGGATGCTTGTAAGCTGGTAGA
AGCGCCTGCTTATGATAAGAAAACATTCATGGCCTATTTTAAGGATTATTGCAAACATGT
TGCAGAGAAATTGACGCAAGAAGGAAGGACTGATGATGTCACGGAGTTCAAGAAACATGC
CACGGATGCTATGAAATATATAAAAGGCAATATAAAGGCTTTTCAGATTTTTACTGGAGA
ATCAGTGGATCCAGACGGTAGCGTGGGGTATCTCGATTGGGAAGATAATGTTCCTTACAT
CCTGTTTTTCAAACACGCACTGGTTGAGGAGAAGGTTTAATTTTACTCTTGTAAATTGTT
CAATTTTACATTAGTCAATATGAGGGTGAGCGAAGTGTTTGTACAAAAATAAATCAAAGA
ATATAAATCA
| PRINTS |
Translational_control_tumour_p (IPR018105) - T[3-23] 4.3E-14 - T[49-60] 4.3E-14 - T[62-81] 4.3E-14 |
| Gene3D |
Mss4/transl-control_tumor (IPR011323) - T[3-172] 6.8E-50 |
| SUPERFAMILY |
Mss4-like_sf (IPR011057) - T[3-172] 1.67E-45 |
| Pfam |
Translational_control_tumour_p (IPR018105) - T[3-167] 3.8E-50 |
| PANTHER |
Translational_control_tumour_p (IPR018105) - T[3-171] 3.2E-39 |
| ProSiteProfiles |
TCTP (IPR034737) - T[3-172] 49.375 |
| ProSitePatterns |
Translation_control_tumour_CS (IPR018103) - T[48-58] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCTP_HUMAN | 38.728 % | 105 | 2.83E-29 |