Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA159YE09' > 
  2. EST 'AHC0AAA233YA03_RM1' > 
  3. Transcript 'KH2012:KH.C5.61.v2.A...' > 
  4. Transcript 'KH2012:KH.L172.26.v1...' > 
  5. Transcript 'KH2012:KH.C7.309.v2....'

Transcript Model

Transcript Id

KH2012:KH.C7.309.v2.A.SL2-1

Possible name(s)

LPP; TRIP6; ZYX

Gene model

KH2012:KH.C7.309

Location

KhC7 [1,499,893 / 1,507,517]

Sequences

Amino acid sequence

Length: 460

>KH.C7.309.v2.A.SL2-1
NLLICTTAKILTPQRNGFAMLKFKVSNSDLFRSNYPEPKQAAKQSNYAMAGPSPVENPYA
MAGPSKVTNTSPKAVSDVDKLTSQLLQGLDTGKRKKSDNIEDFNLPPPPNLDDFTFSPPS
PIKSPDLPPPPPSAVPNVYSPLPPPPAPKPSSQMSKAAPPPVLPKPSKSTPLTKESKRGV
NSITIQLNKPSSAPSPSPPAPTPTTAPAPEQKSAPYVPPASTRPSVGPGSRAGIPKDIKK
NSEEELDFLTNNLLKNMENPRDEEFYGYCERCNGVVEGENVGCTAMDRTFHITCFTCLKC
HRNLHGEQFYCVDKDPWCDKCYMNSLEKCTVCNETITDRILRATNKPYHPHCFQCVMCGK
SLDGVPFTVDEKNEVHCVEDYHKKYAPRCSVCQEAIMPEKGKEETVRIVALERSFHVDCY
KCEKCAVKLNSEKEGRGCFPLDGHIFCRDCNTKIIQHLSA

Nucleotide sequence

Length: 2,417

>KH2012:KH.C7.309.v2.A.SL2-1
AACTTTTTATATACTAACTAAAATCTGCTTATTTGTACCACCGCCAAGATATTAACCCCT
CAACGTAACGGCTTCGCCATGCTCAAATTCAAGGTGAGTAACTCAGACTTATTCCGTTCT
AATTACCCAGAGCCTAAGCAAGCGGCAAAACAAAGCAACTATGCCATGGCTGGTCCTTCG
CCTGTCGAGAATCCTTATGCCATGGCCGGACCTTCAAAGGTTACTAACACCAGTCCAAAA
GCTGTGTCCGACGTAGACAAACTTACAAGTCAACTTCTACAAGGCTTAGATACAGGAAAA
CGCAAGAAATCTGACAATATTGAAGACTTCAATCTTCCACCACCGCCCAACTTGGACGAC
TTCACATTCTCACCGCCTTCACCAATAAAGAGTCCGGATCTTCCCCCACCTCCTCCGTCC
GCTGTTCCCAACGTCTACTCCCCTCTTCCCCCTCCTCCAGCTCCCAAACCTTCCTCCCAG
ATGTCTAAAGCAGCTCCACCTCCCGTCCTCCCAAAACCATCAAAATCAACTCCACTGACG
AAAGAGTCAAAGAGAGGCGTCAACAGCATCACTATTCAATTAAACAAACCGTCATCTGCT
CCTTCTCCTTCTCCTCCTGCTCCCACTCCCACCACTGCTCCTGCTCCAGAGCAAAAATCC
GCTCCGTATGTTCCTCCAGCATCCACCAGACCTTCAGTTGGTCCAGGATCAAGAGCTGGA
ATCCCAAAGGACATCAAGAAGAACTCCGAGGAAGAACTTGACTTTCTCACCAATAATCTG
CTGAAAAACATGGAGAACCCGAGGGATGAAGAATTCTACGGTTACTGCGAACGTTGTAAC
GGTGTGGTTGAAGGAGAAAACGTTGGTTGTACCGCCATGGACCGTACCTTCCATATTACT
TGCTTCACTTGCCTAAAATGCCATCGCAATCTGCACGGTGAACAGTTTTATTGCGTTGAT
AAAGATCCGTGGTGTGATAAATGTTACATGAACTCGTTGGAAAAATGCACAGTCTGCAAC
GAAACCATCACTGACAGGATTCTTCGTGCTACAAACAAGCCGTACCACCCACATTGCTTT
CAGTGCGTGATGTGCGGTAAGAGTCTTGACGGTGTCCCGTTTACAGTGGATGAGAAGAAT
GAGGTGCATTGCGTAGAAGACTACCACAAGAAATACGCACCACGTTGCTCTGTCTGCCAG
GAAGCTATTATGCCAGAGAAAGGCAAAGAAGAGACCGTACGCATCGTTGCCCTTGAACGA
AGTTTCCACGTCGATTGCTACAAATGCGAGAAATGCGCGGTCAAGTTGAATTCGGAGAAA
GAGGGCCGTGGATGCTTTCCCCTTGACGGCCATATCTTCTGTCGGGATTGCAACACCAAA
ATCATACAACACCTTTCTGCATAAGATCCATTTGTTAACGGCTTAACGTTATCAAAAACA
CCATGATTGCATTTTAACGCTTAAGTAGGCCGACAGGATTCATTCCATTTGATCTCATAC
TTTCTGCATTCCAAAATGTTTTTGTTTTAAGCTATTGTTAACGAAAATATTCTTTGGCAG
ATTTTAATGAGTTAAAAAAGTTACCTGCACCTTTTGGTTTTATAATTGATAATGTAGCGG
GCACGATTAATATTGTAACTCAGTCTGTGTAAGCCACCGTTAAAATGCCCCTTTTTATGG
ATTTGTAACACCTTTATGTACTTTATTTTTTGTGCTTTTGCGAATTTTATATTTTACGCT
GATTTTTTGCCGCCGCTTTTGGTCTCTTTTATAAGTTCAAATAAGCACGGTTGATTTTTC
GTCATATACGCGTTGTACATAAAGCGCCTGCATGAAAAGTGAATTCTAGTTGCCTTTACA
CAGCATTACCGCATAGCACTAGCGCTGTAGTCGCTTATATATAATTGTACATTGCGACTG
TCTGTAACTTCTAATGTCCCATATTAGCCAATGGCTATTTACATTTCCTTTGTTAAGTCT
GATAACTTTAACTAAACTTTGTTAAGGCCTCATTGTGCATTCAGCAACTCATTGTGCTTC
AGTATTGTGATTATAAGTCCGAATTGCAAATATTTTCATATTTTTACGAATATGTCTTAC
GGTTTTTACATAAGGTTGCATAGAGTGTAGATTTTAACACTTTTTATTGTTGTAGTACAT
CGCGTTAACGTCGTTGCACTAGCCCAATATTAACTTTGTACAATTGTCCTTGTGTATACG
TAATTAGCTTTTGAGCCGCGCAATTACTTGATTGATTATCGTTCGAACTGGTTCTGGATA
TCAAGTTATTAAGCAGTTTCAACACCTTGAGCTGCGGTTTTGTTATTTGATCTTTGTAAA
ATTTAATTTGTCGTTTACTTCCATTAATGTCGGTTGGCTCATTATTGTCAATCGTGTAAT
AAAATAATGATTTTGAA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[267-326] 9.9 - T[327-387] 13.662 - T[388-457] 10.316
SMART
Znf_LIM (IPR001781) - T[268-321] 2.5E-7 - T[328-380] 8.4E-17 - T[388-450] 1.9E-14
Pfam
Znf_LIM (IPR001781) - T[269-324] 5.8E-11 - T[329-384] 2.0E-11 - T[389-451] 1.9E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 42.816 % 287 2.31E-92
LPP_HUMAN 51.625 % 298 8.07E-95
ZYX_HUMAN 46.816 % 249 1.83E-76