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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. Transcript 'KH2012:KH.C8.428.v2....' > 
  3. Transcript 'KH2012:KH.C7.309.v4....'

Transcript Model

Transcript Id

KH2012:KH.C7.309.v4.A.nonSL7-1

Possible name(s)

LPP; TRIP6; ZYX

Gene model

KH2012:KH.C7.309

Location

KhC7 [1,499,893 / 1,516,272]

Sequences

Amino acid sequence

Length: 469

>KH.C7.309.v4.A.nonSL7-1
LYKNQQIMADNSWLDEELAELDQAERLIHETLNDFTPYTVQTQDEKPKQAAKQSNYAMAG
PSPVENPYAMAGPSKVTNTSPKAVSDVDKLTSQLLQGLDTGKRKKSDNIEDFNLPPPPNL
DDFTFSPPSPIKSPDLPPPPPSAVPNVYSPLPPPPAPKPSSQMSKAAPPPVLPKPSKSTP
LTKESKRGVNSITIQLNKPSSAPSPSPPAPTPTTAPAPEQKSAPYVPPASTRPSVGPGSR
AGIPKDIKKNSEEELDFLTNNLLKNMENPRDEEFYGYCERCNGVVEGENVGCTAMDRTFH
ITCFTCLKCHRNLHGEQFYCVDKDPWCDKCYMNSLEKCTVCNETITDRILRATNKPYHPH
CFQCVMCGKSLDGVPFTVDEKNEVHCVEDYHKKYAPRCSVCQEAIMPEKGKEETVRIVAL
ERSFHVDCYKCEKCAVKLNSEKEGRGCFPLDGHIFCRDCNTKIIQHLSA

Nucleotide sequence

Length: 2,538

>KH2012:KH.C7.309.v4.A.nonSL7-1
ACGACTGCAGTCTCGAATCGTGGCGCCACTCATTTGATTCGGCTGAGCAAGTTTTGGTTT
GGTTTTAACGTCGGCGTGCAGGTAAAATAAACAACTTTTGGGTGAAATTTATTGATTGTA
TAAAAACCAACAAATCATGGCGGACAACTCGTGGCTTGATGAAGAATTGGCTGAACTCGA
TCAGGCTGAACGACTTATTCATGAGACTTTGAATGACTTTACACCATACACAGTCCAAAC
TCAAGATGAAAAGCCTAAGCAAGCGGCAAAACAAAGCAACTATGCCATGGCTGGTCCTTC
GCCTGTCGAGAATCCTTATGCCATGGCCGGACCTTCAAAGGTTACTAACACCAGTCCAAA
AGCTGTGTCCGACGTAGACAAACTTACAAGTCAACTTCTACAAGGCTTAGATACAGGAAA
ACGCAAGAAATCTGACAATATTGAAGACTTCAATCTTCCACCACCGCCCAACTTGGACGA
CTTCACATTCTCACCGCCTTCACCAATAAAGAGTCCGGATCTTCCCCCACCTCCTCCGTC
CGCTGTTCCCAACGTCTACTCCCCTCTTCCCCCTCCTCCAGCTCCCAAACCTTCCTCCCA
GATGTCTAAAGCAGCTCCACCTCCCGTCCTCCCAAAACCATCAAAATCAACTCCACTGAC
GAAAGAGTCAAAGAGAGGCGTCAACAGCATCACTATTCAATTAAACAAACCGTCATCTGC
TCCTTCTCCTTCTCCTCCTGCTCCCACTCCCACCACTGCTCCTGCTCCAGAGCAAAAATC
CGCTCCGTATGTTCCTCCAGCATCCACCAGACCTTCAGTTGGTCCAGGATCAAGAGCTGG
AATCCCAAAGGACATCAAGAAGAACTCCGAGGAAGAACTTGACTTTCTCACCAATAATCT
GCTGAAAAACATGGAGAACCCGAGGGATGAAGAATTCTACGGTTACTGCGAACGTTGTAA
CGGTGTGGTTGAAGGAGAAAACGTTGGTTGTACCGCCATGGACCGTACCTTCCATATTAC
TTGCTTCACTTGCCTAAAATGCCATCGCAATCTGCACGGTGAACAGTTTTATTGCGTTGA
TAAAGATCCGTGGTGTGATAAATGTTACATGAACTCGTTGGAAAAATGCACAGTCTGCAA
CGAAACCATCACTGACAGGATTCTTCGTGCTACAAACAAGCCGTACCACCCACATTGCTT
TCAGTGCGTGATGTGCGGTAAGAGTCTTGACGGTGTCCCGTTTACAGTGGATGAGAAGAA
TGAGGTGCATTGCGTAGAAGACTACCACAAGAAATACGCACCACGTTGCTCTGTCTGCCA
GGAAGCTATTATGCCAGAGAAAGGCAAAGAAGAGACCGTACGCATCGTTGCCCTTGAACG
AAGTTTCCACGTCGATTGCTACAAATGCGAGAAATGCGCGGTCAAGTTGAATTCGGAGAA
AGAGGGCCGTGGATGCTTTCCCCTTGACGGCCATATCTTCTGTCGGGATTGCAACACCAA
AATCATACAACACCTTTCTGCATAAGATCCATTTGTTAACGGCTTAACGTTATCAAAAAC
ACCATGATTGCATTTTAACGCTTAAGTAGGCCGACAGGATTCATTCCATTTGATCTCATA
CTTTCTGCATTCCAAAATGTTTTTGTTTTAAGCTATTGTTAACGAAAATATTCTTTGGCA
GATTTTAATGAGTTAAAAAAGTTACCTGCACCTTTTGGTTTTATAATTGATAATGTAGCG
GGCACGATTAATATTGTAACTCAGTCTGTGTAAGCCACCGTTAAAATGCCCCTTTTTATG
GATTTGTAACACCTTTATGTACTTTATTTTTTGTGCTTTTGCGAATTTTATATTTTACGC
TGATTTTTTGCCGCCGCTTTTGGTCTCTTTTATAAGTTCAAATAAGCACGGTTGATTTTT
CGTCATATACGCGTTGTACATAAAGCGCCTGCATGAAAAGTGAATTCTAGTTGCCTTTAC
ACAGCATTACCGCATAGCACTAGCGCTGTAGTCGCTTATATATAATTGTACATTGCGACT
GTCTGTAACTTCTAATGTCCCATATTAGCCAATGGCTATTTACATTTCCTTTGTTAAGTC
TGATAACTTTAACTAAACTTTGTTAAGGCCTCATTGTGCATTCAGCAACTCATTGTGCTT
CAGTATTGTGATTATAAGTCCGAATTGCAAATATTTTCATATTTTTACGAATATGTCTTA
CGGTTTTTACATAAGGTTGCATAGAGTGTAGATTTTAACACTTTTTATTGTTGTAGTACA
TCGCGTTAACGTCGTTGCACTAGCCCAATATTAACTTTGTACAATTGTCCTTGTGTATAC
GTAATTAGCTTTTGAGCCGCGCAATTACTTGATTGATTATCGTTCGAACTGGTTCTGGAT
ATCAAGTTATTAAGCAGTTTCAACACCTTGAGCTGCGGTTTTGTTATTTGATCTTTGTAA
AATTTAATTTGTCGTTTACTTCCATTAATGTCGGTTGGCTCATTATTGTCAATCGTGTAA
TAAAATAATGATTTTGAA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[276-335] 9.9 - T[336-396] 13.662 - T[397-466] 10.316
SMART
Znf_LIM (IPR001781) - T[277-330] 2.5E-7 - T[337-389] 8.4E-17 - T[397-459] 1.9E-14
Pfam
Znf_LIM (IPR001781) - T[278-333] 5.9E-11 - T[338-393] 2.1E-11 - T[398-460] 2.0E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 42.816 % 288 1.39E-92
LPP_HUMAN 51.625 % 298 6.98E-95
ZYX_HUMAN 46.691 % 249 2.28E-76