Login
Help

TRANSCRIPT CARD

Submit your Data

  1. EST 'BW407972'
  2. Transcript 'Harore.CG.MTP2014.S4...'
  3. Transcript 'KH2012:KH.C7.309.v4....'

Transcript Model

Transcript Id

KH2012:KH.C7.309.v4.A.SL3-1

Possible name(s)

LPP; TRIP6; ZYX

Location

KhC7 [1,499,893 / 1,516,472]

Sequences

Amino acid sequence

Length: 469

>KH.C7.309.v4.A.SL3-1
LYKNQQIMADNSWLDEELAELDQAERLIHETLNDFTPYTVQTQDEKPKQAAKQSNYAMAG
PSPVENPYAMAGPSKVTNTSPKAVSDVDKLTSQLLQGLDTGKRKKSDNIEDFNLPPPPNL
DDFTFSPPSPIKSPDLPPPPPSAVPNVYSPLPPPPAPKPSSQMSKAAPPPVLPKPSKSTP
LTKESKRGVNSITIQLNKPSSAPSPSPPAPTPTTAPAPEQKSAPYVPPASTRPSVGPGSR
AGIPKDIKKNSEEELDFLTNNLLKNMENPRDEEFYGYCERCNGVVEGENVGCTAMDRTFH
ITCFTCLKCHRNLHGEQFYCVDKDPWCDKCYMNSLEKCTVCNETITDRILRATNKPYHPH
CFQCVMCGKSLDGVPFTVDEKNEVHCVEDYHKKYAPRCSVCQEAIMPEKGKEETVRIVAL
ERSFHVDCYKCEKCAVKLNSEKEGRGCFPLDGHIFCRDCNTKIIQHLSA

Nucleotide sequence

Length: 2,738

>KH2012:KH.C7.309.v4.A.SL3-1
CAAAGTTCGTGATTTTGGAGAAACGTTTATCTTTTTGTTATGCGAAACATACGGACTTTG
ATGCCAAACAGTCGATGTTCTCTATTTCGATTTATATTTATCTCCGACTCCACCTGTTGC
ACGACCATTTCCGATTTTATATTTTCGTAACCTTTTTTCTTTTCCTGGAGATTATGCTCG
GGTGTTGTCTTATTTGGTGCACGACTGCAGTCTCGAATCGTGGCGCCACTCATTTGATTC
GGCTGAGCAAGTTTTGGTTTGGTTTTAACGTCGGCGTGCAGGTAAAATAAACAACTTTTG
GGTGAAATTTATTGATTGTATAAAAACCAACAAATCATGGCGGACAACTCGTGGCTTGAT
GAAGAATTGGCTGAACTCGATCAGGCTGAACGACTTATTCATGAGACTTTGAATGACTTT
ACACCATACACAGTCCAAACTCAAGATGAAAAGCCTAAGCAAGCGGCAAAACAAAGCAAC
TATGCCATGGCTGGTCCTTCGCCTGTCGAGAATCCTTATGCCATGGCCGGACCTTCAAAG
GTTACTAACACCAGTCCAAAAGCTGTGTCCGACGTAGACAAACTTACAAGTCAACTTCTA
CAAGGCTTAGATACAGGAAAACGCAAGAAATCTGACAATATTGAAGACTTCAATCTTCCA
CCACCGCCCAACTTGGACGACTTCACATTCTCACCGCCTTCACCAATAAAGAGTCCGGAT
CTTCCCCCACCTCCTCCGTCCGCTGTTCCCAACGTCTACTCCCCTCTTCCCCCTCCTCCA
GCTCCCAAACCTTCCTCCCAGATGTCTAAAGCAGCTCCACCTCCCGTCCTCCCAAAACCA
TCAAAATCAACTCCACTGACGAAAGAGTCAAAGAGAGGCGTCAACAGCATCACTATTCAA
TTAAACAAACCGTCATCTGCTCCTTCTCCTTCTCCTCCTGCTCCCACTCCCACCACTGCT
CCTGCTCCAGAGCAAAAATCCGCTCCGTATGTTCCTCCAGCATCCACCAGACCTTCAGTT
GGTCCAGGATCAAGAGCTGGAATCCCAAAGGACATCAAGAAGAACTCCGAGGAAGAACTT
GACTTTCTCACCAATAATCTGCTGAAAAACATGGAGAACCCGAGGGATGAAGAATTCTAC
GGTTACTGCGAACGTTGTAACGGTGTGGTTGAAGGAGAAAACGTTGGTTGTACCGCCATG
GACCGTACCTTCCATATTACTTGCTTCACTTGCCTAAAATGCCATCGCAATCTGCACGGT
GAACAGTTTTATTGCGTTGATAAAGATCCGTGGTGTGATAAATGTTACATGAACTCGTTG
GAAAAATGCACAGTCTGCAACGAAACCATCACTGACAGGATTCTTCGTGCTACAAACAAG
CCGTACCACCCACATTGCTTTCAGTGCGTGATGTGCGGTAAGAGTCTTGACGGTGTCCCG
TTTACAGTGGATGAGAAGAATGAGGTGCATTGCGTAGAAGACTACCACAAGAAATACGCA
CCACGTTGCTCTGTCTGCCAGGAAGCTATTATGCCAGAGAAAGGCAAAGAAGAGACCGTA
CGCATCGTTGCCCTTGAACGAAGTTTCCACGTCGATTGCTACAAATGCGAGAAATGCGCG
GTCAAGTTGAATTCGGAGAAAGAGGGCCGTGGATGCTTTCCCCTTGACGGCCATATCTTC
TGTCGGGATTGCAACACCAAAATCATACAACACCTTTCTGCATAAGATCCATTTGTTAAC
GGCTTAACGTTATCAAAAACACCATGATTGCATTTTAACGCTTAAGTAGGCCGACAGGAT
TCATTCCATTTGATCTCATACTTTCTGCATTCCAAAATGTTTTTGTTTTAAGCTATTGTT
AACGAAAATATTCTTTGGCAGATTTTAATGAGTTAAAAAAGTTACCTGCACCTTTTGGTT
TTATAATTGATAATGTAGCGGGCACGATTAATATTGTAACTCAGTCTGTGTAAGCCACCG
TTAAAATGCCCCTTTTTATGGATTTGTAACACCTTTATGTACTTTATTTTTTGTGCTTTT
GCGAATTTTATATTTTACGCTGATTTTTTGCCGCCGCTTTTGGTCTCTTTTATAAGTTCA
AATAAGCACGGTTGATTTTTCGTCATATACGCGTTGTACATAAAGCGCCTGCATGAAAAG
TGAATTCTAGTTGCCTTTACACAGCATTACCGCATAGCACTAGCGCTGTAGTCGCTTATA
TATAATTGTACATTGCGACTGTCTGTAACTTCTAATGTCCCATATTAGCCAATGGCTATT
TACATTTCCTTTGTTAAGTCTGATAACTTTAACTAAACTTTGTTAAGGCCTCATTGTGCA
TTCAGCAACTCATTGTGCTTCAGTATTGTGATTATAAGTCCGAATTGCAAATATTTTCAT
ATTTTTACGAATATGTCTTACGGTTTTTACATAAGGTTGCATAGAGTGTAGATTTTAACA
CTTTTTATTGTTGTAGTACATCGCGTTAACGTCGTTGCACTAGCCCAATATTAACTTTGT
ACAATTGTCCTTGTGTATACGTAATTAGCTTTTGAGCCGCGCAATTACTTGATTGATTAT
CGTTCGAACTGGTTCTGGATATCAAGTTATTAAGCAGTTTCAACACCTTGAGCTGCGGTT
TTGTTATTTGATCTTTGTAAAATTTAATTTGTCGTTTACTTCCATTAATGTCGGTTGGCT
CATTATTGTCAATCGTGTAATAAAATAATGATTTTGAA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[276-335] 9.9 - T[336-396] 13.662 - T[397-466] 10.316
SMART
Znf_LIM (IPR001781) - T[277-330] 2.5E-7 - T[337-389] 8.4E-17 - T[397-459] 1.9E-14
Pfam
Znf_LIM (IPR001781) - T[278-333] 5.9E-11 - T[338-393] 2.1E-11 - T[398-460] 2.0E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 42.816 % 288 1.39E-92
LPP_HUMAN 51.625 % 298 6.98E-95
ZYX_HUMAN 46.691 % 249 2.28E-76