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  1. Transcript 'KH2012:KH.C7.309.v5....'

Transcript Model

Transcript Id

KH2012:KH.C7.309.v5.A.SL2-1

Possible name(s)

LPP; TRIP6; ZYX

Location

KhC7 [1,499,893 / 1,507,517]

Sequences

Amino acid sequence

Length: 418

>KH.C7.309.v5.A.SL2-1
NLLICTTAKILTPQRNGFAMLKFKVTNTSPKAVSDVDKLTSQLLQGLDTGKRKKSDNIED
FNLPPPPNLDDFTFSPPSPIKSPDLPPPPPSAVPNVYSPLPPPPAPKPSSQMSKAAPPPV
LPKPSKSTPLTKESKRGVNSITIQLNKPSSAPSPSPPAPTPTTAPAPEQKSAPYVPPAST
RPSVGPGSRAGIPKDIKKNSEEELDFLTNNLLKNMENPRDEEFYGYCERCNGVVEGENVG
CTAMDRTFHITCFTCLKCHRNLHGEQFYCVDKDPWCDKCYMNSLEKCTVCNETITDRILR
ATNKPYHPHCFQCVMCGKSLDGVPFTVDEKNEVHCVEDYHKKYAPRCSVCQEAIMPEKGK
EETVRIVALERSFHVDCYKCEKCAVKLNSEKEGRGCFPLDGHIFCRDCNTKIIQHLSA

Nucleotide sequence

Length: 2,291

>KH2012:KH.C7.309.v5.A.SL2-1
AACTTTTTATATACTAACTAAAATCTGCTTATTTGTACCACCGCCAAGATATTAACCCCT
CAACGTAACGGCTTCGCCATGCTCAAATTCAAGGTTACTAACACCAGTCCAAAAGCTGTG
TCCGACGTAGACAAACTTACAAGTCAACTTCTACAAGGCTTAGATACAGGAAAACGCAAG
AAATCTGACAATATTGAAGACTTCAATCTTCCACCACCGCCCAACTTGGACGACTTCACA
TTCTCACCGCCTTCACCAATAAAGAGTCCGGATCTTCCCCCACCTCCTCCGTCCGCTGTT
CCCAACGTCTACTCCCCTCTTCCCCCTCCTCCAGCTCCCAAACCTTCCTCCCAGATGTCT
AAAGCAGCTCCACCTCCCGTCCTCCCAAAACCATCAAAATCAACTCCACTGACGAAAGAG
TCAAAGAGAGGCGTCAACAGCATCACTATTCAATTAAACAAACCGTCATCTGCTCCTTCT
CCTTCTCCTCCTGCTCCCACTCCCACCACTGCTCCTGCTCCAGAGCAAAAATCCGCTCCG
TATGTTCCTCCAGCATCCACCAGACCTTCAGTTGGTCCAGGATCAAGAGCTGGAATCCCA
AAGGACATCAAGAAGAACTCCGAGGAAGAACTTGACTTTCTCACCAATAATCTGCTGAAA
AACATGGAGAACCCGAGGGATGAAGAATTCTACGGTTACTGCGAACGTTGTAACGGTGTG
GTTGAAGGAGAAAACGTTGGTTGTACCGCCATGGACCGTACCTTCCATATTACTTGCTTC
ACTTGCCTAAAATGCCATCGCAATCTGCACGGTGAACAGTTTTATTGCGTTGATAAAGAT
CCGTGGTGTGATAAATGTTACATGAACTCGTTGGAAAAATGCACAGTCTGCAACGAAACC
ATCACTGACAGGATTCTTCGTGCTACAAACAAGCCGTACCACCCACATTGCTTTCAGTGC
GTGATGTGCGGTAAGAGTCTTGACGGTGTCCCGTTTACAGTGGATGAGAAGAATGAGGTG
CATTGCGTAGAAGACTACCACAAGAAATACGCACCACGTTGCTCTGTCTGCCAGGAAGCT
ATTATGCCAGAGAAAGGCAAAGAAGAGACCGTACGCATCGTTGCCCTTGAACGAAGTTTC
CACGTCGATTGCTACAAATGCGAGAAATGCGCGGTCAAGTTGAATTCGGAGAAAGAGGGC
CGTGGATGCTTTCCCCTTGACGGCCATATCTTCTGTCGGGATTGCAACACCAAAATCATA
CAACACCTTTCTGCATAAGATCCATTTGTTAACGGCTTAACGTTATCAAAAACACCATGA
TTGCATTTTAACGCTTAAGTAGGCCGACAGGATTCATTCCATTTGATCTCATACTTTCTG
CATTCCAAAATGTTTTTGTTTTAAGCTATTGTTAACGAAAATATTCTTTGGCAGATTTTA
ATGAGTTAAAAAAGTTACCTGCACCTTTTGGTTTTATAATTGATAATGTAGCGGGCACGA
TTAATATTGTAACTCAGTCTGTGTAAGCCACCGTTAAAATGCCCCTTTTTATGGATTTGT
AACACCTTTATGTACTTTATTTTTTGTGCTTTTGCGAATTTTATATTTTACGCTGATTTT
TTGCCGCCGCTTTTGGTCTCTTTTATAAGTTCAAATAAGCACGGTTGATTTTTCGTCATA
TACGCGTTGTACATAAAGCGCCTGCATGAAAAGTGAATTCTAGTTGCCTTTACACAGCAT
TACCGCATAGCACTAGCGCTGTAGTCGCTTATATATAATTGTACATTGCGACTGTCTGTA
ACTTCTAATGTCCCATATTAGCCAATGGCTATTTACATTTCCTTTGTTAAGTCTGATAAC
TTTAACTAAACTTTGTTAAGGCCTCATTGTGCATTCAGCAACTCATTGTGCTTCAGTATT
GTGATTATAAGTCCGAATTGCAAATATTTTCATATTTTTACGAATATGTCTTACGGTTTT
TACATAAGGTTGCATAGAGTGTAGATTTTAACACTTTTTATTGTTGTAGTACATCGCGTT
AACGTCGTTGCACTAGCCCAATATTAACTTTGTACAATTGTCCTTGTGTATACGTAATTA
GCTTTTGAGCCGCGCAATTACTTGATTGATTATCGTTCGAACTGGTTCTGGATATCAAGT
TATTAAGCAGTTTCAACACCTTGAGCTGCGGTTTTGTTATTTGATCTTTGTAAAATTTAA
TTTGTCGTTTACTTCCATTAATGTCGGTTGGCTCATTATTGTCAATCGTGTAATAAAATA
ATGATTTTGAA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[225-284] 9.9 - T[285-345] 13.662 - T[346-415] 10.316
SMART
Znf_LIM (IPR001781) - T[226-279] 2.5E-7 - T[286-338] 8.4E-17 - T[346-408] 1.9E-14
Pfam
Znf_LIM (IPR001781) - T[227-282] 5.0E-11 - T[287-342] 1.8E-11 - T[347-409] 1.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 42.899 % 286 1.15E-92
LPP_HUMAN 51.625 % 296 1.21E-94
ZYX_HUMAN 46.816 % 248 1.11E-76





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