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  1. Transcript 'Moocul.CG.ELv1_2.S12...'
  2. Transcript 'KH2012:KH.L98.5.v1.A...'
  3. Transcript 'KH2012:KH.C9.169.v1....'
  4. Transcript 'Mooccu.CG.ELv1_2.S68...'
  5. Transcript 'KH2012:KH.C7.35.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C7.35.v1.A.SL1-1

Possible name(s)

PABPC1; TIA1; TIAL1

Location

KhC7 [1,789,316 / 1,796,455]

Sequences

Amino acid sequence

Length: 493

>KH.C7.35.v1.A.SL1-1
LLFIYCSFLNFATVSFVMNNLNMNFPQQQQVQPQPQEDEAYPKTLYVGNLDPLVSESLIM
ELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHALAAHGAMNQRKILGKEIRVNWATRP
SNKRDTSNHHHIFVGDLAPETTSDDLKTYFSRIGIVSDARVMRDLQTNKSKGYGFVSFVN
YQDAQDIVEKKRIIPDALHGRQVRCNWAARKGGQTGGRTFQKLEFANVVNQSSNTNCTVY
LGGCMSGLTDQLMRETFAGFGNILEIRVFPDKGYSFIRFDNHTDAAQAITNKHGSTLEGY
TVKCSWGKEGTSLGNSNITNNFTNGVGGMDNMQMNQWSPAGADMWGVGQQQQQQSQQYNQ
WTTWRNPNQQQPQQNSWNTWAPNQMTQSNNTWAPPNQMGSNNTWTPNSTNQQQNMSGQQG
QGNSWGWPSMGHQNAGDAWGSNGGDRMWNNWNSQGFGNLTANQGDSQPNGASGAGDQSAA
NPAASQATNGFGI

Nucleotide sequence

Length: 2,107

>KH2012:KH.C7.35.v1.A.SL1-1
CTTTTTGACTGCTTTTTATATATTGTAGTTTTCTGAATTTTGCTACTGTAAGTTTTGTCA
TGAACAATTTGAACATGAATTTTCCGCAACAACAGCAGGTGCAACCACAACCTCAGGAGG
ATGAGGCTTATCCTAAAACTTTGTATGTTGGAAACCTGGACCCGCTTGTTTCTGAATCAT
TGATAATGGAGTTGTTTTGTGTGATTGGACCTTGCAAAAGTTGCAAGATGATAACGGATC
CTGCTGGTGGTGATCCATACTGCTTTGTTGAGTTCTACGAGCATAGTCATGCACTTGCAG
CTCATGGAGCCATGAACCAAAGAAAGATCCTTGGAAAAGAAATTAGAGTGAACTGGGCAA
CTCGTCCTTCTAACAAAAGAGATACAAGCAACCATCACCACATATTTGTTGGCGATTTGG
CACCAGAAACAACGTCCGATGACCTGAAAACTTACTTCAGCAGAATTGGAATTGTTTCTG
ACGCTCGTGTAATGAGAGATCTTCAAACCAACAAGTCTAAAGGATATGGATTTGTTTCAT
TTGTTAACTACCAGGATGCACAAGACATTGTAGAAAAGAAACGAATTATTCCTGATGCTT
TACATGGTCGACAAGTTCGTTGTAACTGGGCTGCAAGGAAGGGAGGTCAAACAGGTGGAA
GAACTTTTCAAAAATTGGAGTTTGCAAATGTGGTGAATCAATCAAGCAATACAAACTGCA
CAGTTTACCTTGGTGGATGTATGTCTGGTCTAACAGATCAACTGATGCGTGAAACATTTG
CTGGATTTGGGAATATTTTGGAAATTCGAGTCTTCCCGGACAAAGGCTATTCATTCATAC
GGTTTGACAATCATACTGACGCAGCCCAAGCAATCACAAATAAGCATGGTTCAACACTGG
AGGGTTATACAGTCAAGTGTTCCTGGGGAAAAGAAGGAACTAGTTTGGGAAATTCAAATA
TTACAAACAACTTTACAAATGGAGTTGGGGGAATGGACAACATGCAGATGAACCAGTGGT
CACCTGCAGGTGCTGATATGTGGGGGGTTGGTCAACAACAACAACAACAATCTCAACAAT
ATAATCAATGGACAACATGGAGGAACCCAAACCAGCAACAACCACAACAAAACTCATGGA
ATACGTGGGCACCAAATCAAATGACTCAATCCAACAACACATGGGCCCCACCAAACCAGA
TGGGGTCAAATAACACATGGACCCCTAATTCAACCAACCAGCAGCAGAATATGAGCGGCC
AGCAGGGGCAGGGTAACTCATGGGGGTGGCCAAGCATGGGTCACCAGAATGCTGGGGACG
CTTGGGGTTCAAATGGTGGTGACAGAATGTGGAATAACTGGAACTCCCAAGGTTTCGGAA
ATCTAACAGCAAACCAAGGTGATAGTCAACCCAACGGTGCGTCTGGTGCTGGAGACCAAT
CTGCTGCCAATCCTGCTGCTTCCCAAGCAACCAACGGGTTCGGAATTTAATTCTTCCCAC
TTCACCAATGGGGGGTACCTGTCCTTGTTCAATTTCTATTTAGTTTTTCTTGGCATCCTT
AAAATTTCTTTTCTTTTGAATAATGAGTGTTATTTCCAGTCAAAATTTCAAGAGATGCAC
ATGCCCTTTGTTATAGGTGTGTTTAATTTTGTTGAAAATAGTAATTCTGATTTTATCTGT
ACACATTAATCCTATGAAAGATTTACCAAAGCATATAAAGGTGCTATGTATTAATGAGCT
ATATCCTAAAAGCACATATAGCTTTAAAATTCCTATATACTAGCCTTGTTTACATTGAGA
GAATTGTACATAATCATGTCGAAATTTAATGGCATATGTGGTCCCTATATCTTTTCCTAT
TTGATATCTATTGAGGTTGAAATTGATGACAAACCTGATGAATTGACAACATTTTGATGC
TTTCACCGCCACACTGCTAACTAGCCTTTGGTCACGCTTTTTTCTAATCGACAGCGTGCA
TGGGCACCTGTCATTTCGCTTCACCTAACAGAGCTGCTAACTTTTTACACCGGATTCAGT
AAACATTCGGCCAATCTGTAAATGAAGTTCATTGTTTGCATTTTATCTTGACTTAATACT
TGTTTCG

InterProScan

SUPERFAMILY
RBD_domain_sf (IPR035979) - T[27-126] 6.38E-23 - T[130-308] 2.79E-38
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[30-124] 9.2E-22 - T[125-214] 4.5E-22 - T[215-314] 1.8E-21
ProSiteProfiles
RRM_dom (IPR000504) - T[43-119] 13.225 - T[130-210] 17.438 - T[237-309] 14.692
SMART
RRM_dom (IPR000504) - T[44-115] 1.6E-16 - T[131-206] 1.1E-19 - T[238-305] 6.2E-14
Pfam
RRM_dom (IPR000504) - T[45-113] 4.6E-12 - T[132-190] 1.0E-17 - T[240-303] 2.6E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TIAR_HUMAN 56.863 % 336 3.78E-112
TIA1_HUMAN 56.803 % 327 2.5E-108
PABP1_HUMAN 30.435 % 103 1.74E-23