- Clone 'AHC0AAA193YE21' >
- Transcript 'KH2012:KH.L98.5.v1.A...' >
- Transcript 'KH2012:KH.C9.169.v1....' >
- Transcript 'Mooccu.CG.ELv1_2.S68...' >
- Transcript 'KH2012:KH.C7.35.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C7.35.v1.A.SL1-1
Possible name(s)
PABPC1; TIA1; TIAL1
Gene model
Location
KhC7 [1,789,316 / 1,796,455]
Amino acid sequence
Length: 493
>KH.C7.35.v1.A.SL1-1
LLFIYCSFLNFATVSFVMNNLNMNFPQQQQVQPQPQEDEAYPKTLYVGNLDPLVSESLIM
ELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHALAAHGAMNQRKILGKEIRVNWATRP
SNKRDTSNHHHIFVGDLAPETTSDDLKTYFSRIGIVSDARVMRDLQTNKSKGYGFVSFVN
YQDAQDIVEKKRIIPDALHGRQVRCNWAARKGGQTGGRTFQKLEFANVVNQSSNTNCTVY
LGGCMSGLTDQLMRETFAGFGNILEIRVFPDKGYSFIRFDNHTDAAQAITNKHGSTLEGY
TVKCSWGKEGTSLGNSNITNNFTNGVGGMDNMQMNQWSPAGADMWGVGQQQQQQSQQYNQ
WTTWRNPNQQQPQQNSWNTWAPNQMTQSNNTWAPPNQMGSNNTWTPNSTNQQQNMSGQQG
QGNSWGWPSMGHQNAGDAWGSNGGDRMWNNWNSQGFGNLTANQGDSQPNGASGAGDQSAA
NPAASQATNGFGI
Nucleotide sequence
Length: 2,107
>KH2012:KH.C7.35.v1.A.SL1-1
CTTTTTGACTGCTTTTTATATATTGTAGTTTTCTGAATTTTGCTACTGTAAGTTTTGTCA
TGAACAATTTGAACATGAATTTTCCGCAACAACAGCAGGTGCAACCACAACCTCAGGAGG
ATGAGGCTTATCCTAAAACTTTGTATGTTGGAAACCTGGACCCGCTTGTTTCTGAATCAT
TGATAATGGAGTTGTTTTGTGTGATTGGACCTTGCAAAAGTTGCAAGATGATAACGGATC
CTGCTGGTGGTGATCCATACTGCTTTGTTGAGTTCTACGAGCATAGTCATGCACTTGCAG
CTCATGGAGCCATGAACCAAAGAAAGATCCTTGGAAAAGAAATTAGAGTGAACTGGGCAA
CTCGTCCTTCTAACAAAAGAGATACAAGCAACCATCACCACATATTTGTTGGCGATTTGG
CACCAGAAACAACGTCCGATGACCTGAAAACTTACTTCAGCAGAATTGGAATTGTTTCTG
ACGCTCGTGTAATGAGAGATCTTCAAACCAACAAGTCTAAAGGATATGGATTTGTTTCAT
TTGTTAACTACCAGGATGCACAAGACATTGTAGAAAAGAAACGAATTATTCCTGATGCTT
TACATGGTCGACAAGTTCGTTGTAACTGGGCTGCAAGGAAGGGAGGTCAAACAGGTGGAA
GAACTTTTCAAAAATTGGAGTTTGCAAATGTGGTGAATCAATCAAGCAATACAAACTGCA
CAGTTTACCTTGGTGGATGTATGTCTGGTCTAACAGATCAACTGATGCGTGAAACATTTG
CTGGATTTGGGAATATTTTGGAAATTCGAGTCTTCCCGGACAAAGGCTATTCATTCATAC
GGTTTGACAATCATACTGACGCAGCCCAAGCAATCACAAATAAGCATGGTTCAACACTGG
AGGGTTATACAGTCAAGTGTTCCTGGGGAAAAGAAGGAACTAGTTTGGGAAATTCAAATA
TTACAAACAACTTTACAAATGGAGTTGGGGGAATGGACAACATGCAGATGAACCAGTGGT
CACCTGCAGGTGCTGATATGTGGGGGGTTGGTCAACAACAACAACAACAATCTCAACAAT
ATAATCAATGGACAACATGGAGGAACCCAAACCAGCAACAACCACAACAAAACTCATGGA
ATACGTGGGCACCAAATCAAATGACTCAATCCAACAACACATGGGCCCCACCAAACCAGA
TGGGGTCAAATAACACATGGACCCCTAATTCAACCAACCAGCAGCAGAATATGAGCGGCC
AGCAGGGGCAGGGTAACTCATGGGGGTGGCCAAGCATGGGTCACCAGAATGCTGGGGACG
CTTGGGGTTCAAATGGTGGTGACAGAATGTGGAATAACTGGAACTCCCAAGGTTTCGGAA
ATCTAACAGCAAACCAAGGTGATAGTCAACCCAACGGTGCGTCTGGTGCTGGAGACCAAT
CTGCTGCCAATCCTGCTGCTTCCCAAGCAACCAACGGGTTCGGAATTTAATTCTTCCCAC
TTCACCAATGGGGGGTACCTGTCCTTGTTCAATTTCTATTTAGTTTTTCTTGGCATCCTT
AAAATTTCTTTTCTTTTGAATAATGAGTGTTATTTCCAGTCAAAATTTCAAGAGATGCAC
ATGCCCTTTGTTATAGGTGTGTTTAATTTTGTTGAAAATAGTAATTCTGATTTTATCTGT
ACACATTAATCCTATGAAAGATTTACCAAAGCATATAAAGGTGCTATGTATTAATGAGCT
ATATCCTAAAAGCACATATAGCTTTAAAATTCCTATATACTAGCCTTGTTTACATTGAGA
GAATTGTACATAATCATGTCGAAATTTAATGGCATATGTGGTCCCTATATCTTTTCCTAT
TTGATATCTATTGAGGTTGAAATTGATGACAAACCTGATGAATTGACAACATTTTGATGC
TTTCACCGCCACACTGCTAACTAGCCTTTGGTCACGCTTTTTTCTAATCGACAGCGTGCA
TGGGCACCTGTCATTTCGCTTCACCTAACAGAGCTGCTAACTTTTTACACCGGATTCAGT
AAACATTCGGCCAATCTGTAAATGAAGTTCATTGTTTGCATTTTATCTTGACTTAATACT
TGTTTCG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[27-126] 6.38E-23 - T[130-308] 2.79E-38 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[30-124] 9.2E-22 - T[125-214] 4.5E-22 - T[215-314] 1.8E-21 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[43-119] 13.225 - T[130-210] 17.438 - T[237-309] 14.692 |
| SMART |
RRM_dom (IPR000504) - T[44-115] 1.6E-16 - T[131-206] 1.1E-19 - T[238-305] 6.2E-14 |
| Pfam |
RRM_dom (IPR000504) - T[45-113] 4.6E-12 - T[132-190] 1.0E-17 - T[240-303] 2.6E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TIAR_HUMAN | 56.863 % | 336 | 3.78E-112 |
| TIA1_HUMAN | 56.803 % | 327 | 2.5E-108 |
| PABP1_HUMAN | 30.435 % | 103 | 1.74E-23 |