Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.447.v1.A.SL1-1

Possible name(s)

CHSY3; CSGALNACT1; CSGALNACT2

Gene model

KH2012:KH.C7.447

Location

KhC7 [2,076,564 / 2,079,020]

Sequences

Amino acid sequence

Length: 474

>KH.C7.447.v1.A.SL1-1
KMRFLRGLNILRIMTGIMLGFLSRIAFEQLRGSTRLTVGTHMDNIKSLDCPKCPIDDHCT
LCEPTHVKNPTENIPSAYKPKGMYEVTRWLQFDEHYVYDIINEEPKIPLVGHWLEEVRAV
TQVAMDYINANRMLGQSWSLVKLHDGYLRRDALRGTEYILDVVVQPASHNFSYFINERMF
RVNLVHPLKSMGEAEEVRVQRHVEGRLKIIVPVKITSPGIVASIDNFVKSKPKPQVHLVL
VLFLGSNKKEISGYKNKLQELETKIKSHQKVNIQIYPVEGLYSYFKGVRYGIKKATISTD
VVLLATIEAAFTEQLYHHCQANAIPKKRVYFPIAFGQFNPDIIKKGMPPGKPKDVNKRDH
NKFTGYWMHDTFDFVCANQADMVGILNNLSSLGRRMGSTTEALGTKIYDAFLRSDIEVIC
AVEPGLYRTYGMTCSKGELTDKSYQHCMRTKAMSLGSKPALGILYINEVLQKKN

Nucleotide sequence

Length: 1,787

>KH2012:KH.C7.447.v1.A.SL1-1
TATATGCTAGGTTGTTTTAAAGGAATAATATAATGCATAACAGAGGGTTATGACCAAGAT
CCAATGCCTTATGTTTGAAAGCAACTTGAAGAAAGGAATAAAAGATGAGGTTTCTAAGAG
GATTGAACATTCTACGTATTATGACCGGGATAATGCTGGGTTTTTTAAGTCGGATTGCAT
TTGAACAATTAAGGGGTTCAACTAGACTTACTGTAGGGACCCACATGGATAACATAAAGA
GCCTTGATTGCCCAAAATGCCCAATTGATGACCACTGTACACTGTGTGAACCTACACACG
TCAAAAACCCTACAGAAAATATTCCGAGTGCTTATAAACCAAAGGGTATGTATGAGGTCA
CTAGGTGGCTTCAGTTTGATGAGCATTACGTCTATGACATCATAAATGAAGAACCGAAGA
TTCCGTTAGTAGGACACTGGCTTGAAGAGGTTCGAGCTGTCACTCAAGTTGCAATGGATT
ATATAAACGCCAACAGAATGCTAGGGCAAAGCTGGAGTTTAGTTAAATTACACGATGGAT
ATTTAAGAAGAGATGCTTTGCGTGGTACGGAGTATATACTAGATGTGGTGGTGCAGCCCG
CAAGTCATAACTTTAGTTATTTCATAAATGAGAGAATGTTTAGGGTGAATCTTGTGCATC
CCTTGAAGTCAATGGGTGAAGCAGAAGAAGTAAGAGTCCAACGTCATGTGGAGGGTCGGT
TGAAGATAATTGTACCAGTAAAGATTACCTCGCCTGGCATTGTGGCATCGATAGATAACT
TTGTGAAATCAAAACCTAAACCCCAAGTTCACCTAGTGCTTGTTCTATTTCTTGGAAGCA
ACAAAAAAGAAATATCTGGGTATAAAAATAAACTTCAAGAACTGGAAACCAAAATTAAAA
GCCACCAAAAAGTGAACATACAAATCTACCCTGTGGAAGGTTTATACAGCTATTTCAAGG
GGGTAAGATATGGAATAAAGAAGGCAACGATATCTACTGATGTTGTTTTACTTGCAACCA
TTGAAGCTGCTTTCACAGAGCAATTATATCATCACTGTCAAGCAAATGCTATCCCTAAAA
AACGAGTATATTTTCCTATTGCATTCGGACAATTCAACCCAGACATTATTAAAAAAGGAA
TGCCGCCTGGGAAACCTAAAGATGTCAACAAGAGAGACCATAATAAATTCACAGGGTATT
GGATGCATGACACTTTTGACTTTGTATGTGCTAATCAAGCTGACATGGTCGGAATACTTA
ACAATTTAAGCTCTCTGGGCAGAAGAATGGGCTCGACTACAGAGGCACTCGGGACCAAAA
TATACGATGCTTTTTTACGAAGTGACATTGAGGTTATATGTGCAGTGGAGCCAGGGTTGT
ATAGGACTTATGGCATGACGTGTTCAAAAGGTGAATTAACAGATAAATCATATCAACATT
GTATGAGAACTAAGGCTATGAGTCTCGGTTCAAAGCCCGCGCTGGGTATTTTATATATAA
ATGAAGTTTTGCAGAAGAAAAACTGATTTTTTGAAAAAGTAATTTTCTTGTTTCTTTTTA
ATATTATGCCAAAACATTGTGTATCTGTGTTTTAGTTTATGTGCCAATTTCCTTTTTAGT
TAAATGGCTGCAACTGTAGTTAACTACATTTTTAAAGCATCGTAATATGGTGAAGCAATA
ATATATAGTTAAAAAAATATATTTTAATTATTGTGTGCAATTATTTTTGTCATACTGTCT
AAATGCGATACTAATTAGAATTTGTTATTAAAAAAGCATCTTGCCAA

InterProScan

Pfam	Chond_GalNAc (IPR008428) - T[72-461] 1.8E-55

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CHSS3_HUMAN	21.973 %	85.1	1.73E-17
CGAT2_HUMAN	23.739 %	90.9	1.85E-19