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- Transcript 'KH2012:KH.C7.470.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.470.v1.A.ND1-1
Possible name(s)
CCNA1; CCNB1; CCNO
Gene model
Location
KhC7 [2,477,435 / 2,482,537]
Amino acid sequence
Length: 559
>KH.C7.470.v1.A.ND1-1
LDMNNLCKTPVVLLHENEAKQQTHVDGYAAKRRDEFYLQHLKGTVCSLEAPSHKSTKCGT
GLRNIVGSNPDFTVDGFNYDKNNNNCSDGLLQGNICKQNGSSKTKKTSSGSSKRRRSNGR
KVAIAAPSSIRSSVSKLGRCGFGSTKRSSGDSKIQNLAKRFRSSEYLARSPNLSEKPGFQ
NDYLGMSETCVMYDDYVVIEKSSEKSYVHYYEKWSNESDKSSPNASLATPDSTLYCYEEA
AFDDKSVTGCEFSDIGLAIFAVTSLDKLDIRDVYWQMKAKEYYSHPSTSLCEQKIITQRC
RFILVEWLVMVTHHYKIQGETLHLAVNILDRYLEREFVTIRKKYLQLIGITSLLIAAKQL
EVEIPPVSACLGLCRNLYTRPQLLSLERVLLITIGFDLNVPSSHLFYDTIISIHYDVYVQ
KCHVVLVKDEPADVQEYFIALLCLGRSFLEKGLTNYQFVQFPPSVAARAAFRLSTSILDE
PASSVGLKVFQDYSWPKYDSRASFNAGSWDGVTITEEELLEYEEENVLSCLHSIRSLYDE
AELKSFSRSTAAFVPKYLY
Nucleotide sequence
Length: 2,404
>KH2012:KH.C7.470.v1.A.ND1-1
AGACATAGCCTGCTTTGATTAGATATGAACAACTTATGCAAGACACCTGTCGTCTTACTG
CATGAAAACGAAGCGAAGCAGCAGACGCACGTTGATGGTTATGCTGCAAAGCGCAGAGAC
GAATTCTACCTACAACATTTAAAAGGTACCGTTTGTTCATTGGAAGCACCATCGCATAAA
TCGACAAAATGTGGAACAGGATTACGCAATATAGTTGGATCCAATCCAGACTTCACTGTG
GATGGATTTAACTATGACAAAAACAACAACAACTGCAGCGATGGATTGCTTCAAGGCAAT
ATATGCAAACAAAATGGAAGTTCAAAAACCAAGAAAACTTCTTCTGGATCCTCAAAAAGA
CGACGAAGTAATGGAAGAAAAGTCGCCATAGCTGCACCATCCTCTATTAGATCTTCTGTG
AGCAAATTAGGAAGATGTGGTTTTGGTTCAACCAAGCGCAGTAGTGGAGATTCAAAGATT
CAGAATTTGGCCAAGAGGTTTAGAAGCAGTGAGTACTTGGCAAGATCCCCCAATCTTTCT
GAAAAGCCAGGATTTCAGAATGATTATCTTGGAATGAGCGAGACATGCGTCATGTATGAT
GATTATGTTGTCATAGAGAAAAGCTCTGAAAAGTCCTATGTTCATTATTATGAAAAGTGG
TCGAACGAATCAGATAAAAGTTCTCCAAATGCAAGCTTAGCAACACCTGATAGCACACTG
TACTGCTACGAGGAGGCCGCATTTGATGATAAATCGGTCACTGGGTGTGAGTTTAGTGAT
ATTGGTCTTGCCATCTTTGCCGTGACATCTCTGGATAAGCTGGACATCCGCGATGTCTAT
TGGCAGATGAAAGCAAAAGAATATTACTCTCATCCTAGCACATCTCTTTGTGAACAAAAA
ATCATAACCCAGCGCTGTCGATTCATCTTGGTGGAATGGTTAGTGATGGTAACCCACCAT
TACAAGATACAAGGTGAAACATTACATCTTGCTGTAAATATTCTTGATCGATATTTGGAG
AGAGAATTTGTCACAATAAGAAAGAAATATCTTCAGTTGATTGGAATCACTAGCTTGCTT
ATTGCTGCTAAACAGCTTGAAGTTGAAATTCCACCAGTTTCTGCCTGCTTGGGTCTTTGT
AGAAACCTCTACACTCGCCCACAACTGCTATCATTGGAGCGTGTTCTGTTGATCACAATA
GGATTTGATTTAAACGTTCCATCATCACACTTGTTCTATGACACCATTATCAGCATCCAT
TATGATGTTTACGTGCAGAAATGTCATGTTGTGTTGGTGAAAGATGAACCAGCGGATGTA
CAAGAATATTTCATTGCTTTGCTTTGTCTTGGTCGAAGTTTTCTTGAGAAGGGTCTCACC
AACTACCAGTTTGTGCAGTTTCCTCCTTCTGTTGCTGCAAGAGCTGCCTTTCGTCTTTCT
ACTTCAATTCTAGATGAACCTGCATCTTCTGTTGGGTTAAAAGTCTTCCAAGATTACTCC
TGGCCAAAATATGATTCCAGGGCATCTTTTAATGCTGGTTCCTGGGATGGAGTAACCATC
ACAGAGGAAGAGCTGTTGGAATATGAAGAGGAGAATGTCCTCTCTTGTCTCCACTCCATT
AGATCCTTGTATGATGAAGCTGAGCTGAAGAGTTTCAGTAGATCAACAGCTGCGTTTGTT
CCCAAGTATCTCTACTGAGGTATGGTGTAAAAATAGCTTAGCAAATTGATGGATTATTTG
GAATGTGTTTACCAAGATTGTAAATATCATGTTGGACAATTTGTGTTTTCTGTGTTTGAT
TACTTATCTGCCTTGTTACCGTTGTAGAAATTTAGGTAAAATTTAATTCACTAAAAAAAT
TGTCAGTTAGGTTCAAGTTTTCTTTGTTGCTTATTGTTCTCTTACTTTCCTTATTATTCT
TGTTGTTTGTTTGCACTTTATCGTCACAATTCCTTCTTTCTTTTAACTCGGACGGTGTCG
AGTTTACCTATCCGATTGTGACTTCAGTTTGGACAATTTACTTCTTTTCCAACTCTTTAT
CCCGGGTAATTAACCGTGACCCCATGTTTTATTAAAATAAATCAAGTACAGGTGCAGTAA
ATAACACTAACACCATTATTACCCATTATACACATGGGCGTATACAGCGAATATTTCAAA
GTTCGGAGGGAATATTTTAGTGTCATACAGATTTGCTGCAATAGAAAACTTAAAATTAAT
GATCTTTGAATGTTGTATCTAGTAATGCTTTAGTTGCAAATTGTGTAGCGTGATTTGTTT
GATATTTCTTCCGGTACTGCCATGACCATTTTCTGCAGTGTTGCCTATGCTGTGAGTTGG
CTGTTTGTTTCTTTGTGTTGTTTGTTGTTATTTCTTCCATATCTAAATAAAGCAGAACAA
GCAA
| SUPERFAMILY |
Cyclin-like_sf (IPR036915) - T[269-399] 7.02E-32 - T[441-497] 3.95E-6 |
| Pfam |
Cyclin_N (IPR006671) - T[272-399] 1.7E-28 |
| ProSitePatterns |
Cyclin_N (IPR006671) - T[301-332] . |
| CDD |
Cyclin-like (IPR013763) - T[301-391] 4.43063E-13 |
| SMART |
Cyclin-like (IPR013763) - T[306-392] 2.1E-16 - T[417-528] 2.0 |
| Pfam |
Cyclin_C-dom (IPR004367) - T[441-542] 1.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CCNB2_HUMAN | 27.82 % | 90.9 | 1.29E-19 |
| CCNA1_HUMAN | 31.02 % | 94.4 | 1.76E-20 |
| CCNO_HUMAN | 32.579 % | 97.4 | 5.16E-22 |