Login
Help

Submit your Data

  1. Clone 'cima8106410'
  2. Molecular Tool 'cieg14g10-MO'
  3. Transcript 'KH2012:KH.C3.101.v2....'
  4. Transcript 'Phmamm.CG.MTP2014.S2...'
  5. Transcript 'KH2012:KH.C7.52.v5.A...'

Transcript Model

Transcript Id

KH2012:KH.C7.52.v5.A.ND2-1

Possible name(s)

CABIN1

Location

KhC7 [421,201 / 443,940]

Sequences

Amino acid sequence

Length: 1,127

>KH.C7.52.v5.A.ND2-1
LEQLNSSLDQIFFCIYGYPAKPKTRKIQEHSAKQSTLKWSDFLTLFCYFRPRHLPEFDSF
KASTVSTDLSQLILRGLHLVPDALLDQIPNTEAEVISFIEADCDVTIRSLKSPDASNKEL
DVLADMYYLLGDFNLKNHEINKAVKYYLLDIRIHPERFDSWAGMALARTSQIDDRLRLCE
SKKSHHKFSDSGTERRAMAALACYKRALSIEADSVKLWIEYGSLAYWIQSMYSRKLMRKS
KSIRGDELNIEAKQKQMITIAKKSFRSAQACDNDDIYEEEWFTNYMLGKLMEKEGNPPTV
FLKLYQSAVVLLHKSGAKYPKKILAKYGSVSGYAIEALEMHFRIHSSILKYILKHGENIS
YSEIQYMEGLVEEMANSPFVLREESKSMTSYTTDAEKIVPHSKLVVVSESSDLTMGSLLP
DSVLQALNIETEENQEDSLPSVASSTAPPDDCTTVTTTLSGVQCSVTTTVSPPVETIHNP
LRHKADCDAIVDACERALKLCAGRFPLHNKSIYRLAHLYAHYPRKLRLQWSVDLILGSSS
PWQQQEHMPGPGLLSDRNKTNVFNGVWRIPIDDIDRPGSFSFHLYRCVSLLIEVTRQLRH
TETLLYLHNMLNRNPDHGKRYLRDEDRIQLARRAIVYCRALLNRKLRAIPLPQLLPSPKD
HTYHIPFHGPQIVTSSLNQSFVTSSDQSDPIHLHIAEQVFARPLPPDLLTSKTFSSKYLI
PQLHSDTYTASMTSGKPTSADECLSAVIEAYKVYQETQKHPDSTTKVDVQTDPDDITHQR
LLADAYHKYTCLVGKRSHSSSSPTAPLTPSKVGEVLEQAIRFCQQHIAHKKQLQAATQSS
KSSVSSTTSGGCKSRVPEHSKGHGEVTKADSSEAAANHVKELSLASPRKEPKSDKNQQCP
VTSTSLQTNGQEGVTIVQKDGIKYTRIVPPTRPLPQSSLTHSAQSAFTSTQKEGEKDSKR
PKMDPKLGHLADMKGEGLRNKLVRSTSVPVTNAGMLHVFPEDSSDSENKPPMHHRHRLIA
RTSSSVSDYTKNKLKLSILAKTSAALVRKPSITDQEMMQIHDDPDAEESSSGSEDEDDAG
ASTSWRGKRKYSDEAPPALSTVNQAVQCITSQLSPIHTAVITTAGST

Nucleotide sequence

Length: 3,794

>KH2012:KH.C7.52.v5.A.ND2-1
AGTTGGAACAACTCAATTCATCTCTGGATCAAATATTTTTCTGTATATACGGATATCCTG
CTAAACCCAAGACAAGGAAAATACAAGAACATTCTGCTAAACAGTCGACTCTCAAATGGT
CCGACTTTCTCACCCTCTTCTGTTACTTTCGACCTCGCCACTTGCCAGAATTCGACAGTT
TTAAAGCAAGCACCGTTTCCACTGATCTATCTCAACTTATTCTACGTGGATTGCATTTGG
TTCCTGATGCATTGCTGGATCAAATTCCCAACACTGAGGCTGAGGTTATCTCGTTCATAG
AGGCAGACTGTGATGTCACAATTAGATCACTGAAGTCTCCAGATGCGTCTAACAAAGAGC
TCGATGTCCTCGCTGACATGTACTACCTCCTTGGAGATTTTAACTTGAAAAATCATGAAA
TAAATAAAGCTGTCAAGTATTACTTACTAGACATAAGGATTCACCCAGAAAGGTTTGACT
CGTGGGCGGGCATGGCCCTTGCAAGGACAAGCCAGATAGATGACAGGCTTCGTCTTTGCG
AGTCAAAAAAATCTCACCACAAGTTTTCAGACAGTGGTACAGAGAGACGTGCCATGGCTG
CTTTAGCTTGCTATAAACGAGCTCTAAGTATAGAAGCTGACAGTGTTAAGCTGTGGATTG
AATATGGATCGTTGGCTTACTGGATTCAATCTATGTACTCAAGAAAACTAATGAGAAAAT
CAAAGTCAATAAGAGGAGATGAATTAAACATTGAAGCAAAACAGAAGCAAATGATCACAA
TTGCAAAGAAAAGTTTTCGAAGCGCACAAGCTTGTGATAATGATGATATATATGAAGAAG
AATGGTTCACCAACTATATGCTGGGCAAACTTATGGAGAAGGAAGGCAATCCACCAACTG
TGTTCCTTAAACTATATCAGTCTGCTGTTGTATTGCTGCATAAGAGTGGAGCGAAATACC
CGAAGAAAATTTTAGCGAAGTATGGCAGTGTGTCAGGTTACGCCATTGAAGCACTAGAGA
TGCATTTCCGAATCCATTCTTCCATATTAAAGTATATACTCAAGCATGGAGAAAACATTT
CATATTCAGAAATCCAATATATGGAAGGTTTGGTAGAAGAGATGGCAAACAGCCCATTTG
TTCTTAGAGAAGAATCTAAGTCTATGACATCATACACCACTGATGCGGAAAAGATTGTTC
CACATTCGAAACTGGTCGTCGTTTCAGAGTCTTCTGACCTTACGATGGGTTCCTTGCTAC
CCGACTCTGTTCTTCAGGCTCTTAACATTGAAACAGAAGAGAACCAGGAAGACAGTCTAC
CATCAGTAGCCAGCTCCACGGCGCCACCTGACGATTGCACAACCGTCACAACAACGCTAA
GTGGAGTGCAGTGTTCCGTTACAACTACAGTTTCCCCGCCGGTCGAAACAATCCACAATC
CTCTACGTCACAAAGCGGACTGTGACGCAATAGTAGATGCATGTGAAAGGGCGTTGAAAT
TGTGTGCCGGTCGTTTTCCTCTTCACAATAAATCCATATACAGACTGGCTCACCTTTATG
CACACTACCCTAGAAAGCTGCGCCTTCAGTGGTCAGTCGACCTGATTCTGGGCAGCTCGT
CACCATGGCAACAGCAGGAACACATGCCGGGCCCTGGGTTGTTGTCCGACCGCAACAAGA
CCAACGTTTTTAACGGTGTATGGAGGATTCCAATTGATGATATTGACAGGCCCGGGAGCT
TTTCATTTCATCTTTATCGCTGCGTGTCGCTGTTGATTGAGGTCACGAGACAATTACGTC
ACACGGAAACTTTGTTATATTTGCATAACATGCTTAACAGGAATCCTGACCACGGAAAAC
GATATTTGCGCGACGAGGACAGGATACAGCTTGCTAGGCGAGCAATTGTTTACTGCCGAG
CTCTGCTCAACCGAAAACTGCGCGCTATACCACTACCGCAGTTACTACCCTCTCCTAAAG
ATCACACGTACCATATTCCTTTCCACGGACCCCAGATTGTGACGTCATCGTTAAACCAAT
CTTTTGTGACGTCATCAGATCAAAGTGACCCTATACATCTCCACATAGCTGAACAAGTTT
TCGCTCGCCCCCTACCCCCGGACCTACTGACCTCGAAGACTTTTTCTTCCAAGTACCTGA
TACCGCAGCTACATAGCGACACGTATACTGCTAGTATGACCTCTGGTAAACCCACCAGCG
CCGACGAATGCCTTAGTGCCGTTATAGAAGCTTACAAGGTGTACCAAGAGACACAGAAAC
ACCCGGATTCTACGACCAAAGTCGACGTCCAGACCGACCCGGACGACATTACTCATCAGC
GACTTCTAGCGGACGCCTACCACAAATACACATGCTTAGTCGGAAAGCGCTCCCATTCCT
CCTCCTCTCCCACTGCTCCTCTCACTCCCTCCAAAGTAGGAGAAGTTTTGGAGCAAGCCA
TCCGATTTTGCCAACAGCACATCGCTCATAAGAAACAGTTGCAGGCAGCTACACAGTCTT
CAAAATCTTCCGTATCTTCCACGACGTCCGGAGGTTGCAAGAGCAGAGTCCCGGAGCACT
CCAAGGGTCACGGAGAAGTAACGAAAGCCGACAGCTCAGAGGCTGCAGCAAATCACGTCA
AGGAACTGTCGCTTGCATCGCCAAGAAAAGAACCAAAGTCAGACAAGAACCAGCAGTGTC
CAGTTACTTCAACAAGTCTACAAACCAACGGTCAGGAAGGGGTGACCATCGTCCAAAAAG
ATGGCATAAAATACACACGAATCGTCCCACCTACTCGACCCTTACCACAATCAAGCTTAA
CCCATTCCGCACAAAGCGCCTTCACTTCCACGCAGAAGGAAGGGGAAAAAGACAGTAAAC
GGCCGAAAATGGACCCCAAACTTGGCCACTTGGCCGACATGAAAGGCGAAGGTTTACGCA
ACAAACTAGTTCGTTCGACTTCCGTGCCCGTCACCAATGCGGGGATGCTGCATGTCTTCC
CGGAGGATAGTTCCGACTCTGAGAATAAACCTCCGATGCATCATCGACATCGTCTTATCG
CTCGAACCAGCTCCTCCGTCTCTGATTACACAAAAAATAAACTTAAACTGTCCATCCTAG
CCAAGACGTCGGCTGCTTTGGTTCGGAAACCGAGTATAACAGATCAAGAAATGATGCAGA
TCCATGACGACCCGGATGCCGAAGAGTCTTCCTCGGGTAGTGAGGACGAAGATGATGCTG
GCGCCTCTACCTCATGGCGAGGGAAGAGGAAATACTCCGATGAAGCCCCTCCTGCTCTTT
CCACCGTCAACCAAGCTGTCCAATGCATCACAAGTCAATTATCTCCAATCCACACCGCCG
TCATCACAACTGCTGGTTCAACGTAGCGTCTCTGTTTCCCGCCGGTGATTACCCGGTCGT
TAATAATTGCCATGTCAACAATTTTCGTCTCCTGAACCATTTTCTTATAGTCGGTCGCTG
TCACCCCGCGTGACTGGCGACACCGAGACGATGTTTCCCGCCCGTCCAATTTCTTGTCTG
TTTTTTTGTCGTTTTTCAAAATCAAAACACATTCCTTTGACGGATTCTGAACAGAAGACT
TTTATCTGCAGAACATACGGCAAACAGCCACCGTCATCCCCAGCGCAGCATTCCGTATTT
TTTTCGTTTTCTTTCCGCTTTGTTGCTGCTTCGTAAAAATGAGATTTCTATTGTGATTAA
TTTGCTCATAAAGCATTCCTCTTATTTCCTCCGACCACCGGAATGTGAATAAACCGAATA
AATGAGCTGAACGG

InterProScan

PANTHER
Hir3/CABIN1 (IPR033053) - T[5-835] 9.8E-157 - T[967-1051] 9.8E-157
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[110-330] 1.2E-7
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[123-228] 4.14E-6
ProSiteProfiles
TPR_repeat (IPR019734) - T[124-157] 8.791

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CABIN_HUMAN 39.437 % 283 2.14E-78





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.