Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.C.nonSL3-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,054]

Sequences

Amino acid sequence

Length: 351

>KH.C7.55.v1.C.nonSL3-1
LETQMSKVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLVMA
KVNPLLHNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQLHP
VLFDTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSNSP
LWVKGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDFDE
YLENRNLSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSRCI
LDELEHKVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,202

>KH2012:KH.C7.55.v1.C.nonSL3-1
ACTAGAAACTCAAATGTCTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAATAAGATT
CAAAATGAAGCTTTGTTGTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACAAAGTAT
TCAAAGTCGAAATTCTCATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGTGATGGC
TAAAGTTAATCCACTTCTACACAACGTAACCATTCAAGAAGTTCCGAAGATATCAGATAA
AATTCCTGTTTTTCGTCACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTATTTCTGT
GTGGCTGGACAACCTGCTTCACGCCAGACCACAATATAATTCTGTTGTTCAACTACATCC
AGTTCTATTTGATACACATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATGGCAGCA
GGAATACAGAGAGGTTGACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACGAGGTAA
AAAGAAGCCATGGCCACAAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAATTCACC
ACTTTGGGTAAAAGGTGGTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATTTTATGA
ACTAAATCCAAATACGTTACTAGATGGCTTATTAATTGCTTTATCAATCAAACACATTCA
AAATGATTTGATCATCATTGAATCAGCTCAAATTTCACAGGATATGCCCGACTTTGATGA
ATATTTAGAAAATCGAAATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGAGAATGA
AAATATTTCTTATCTTGAACACTTAGCTGAAGATTCTAAACTTTTAAATATAATGCCTTT
GTATGGTTTAAATGTTTGCAGTATTTTAAAACATGACAAACTTGTCCTATCCAGATGCAT
ACTAGATGAACTTGAGCACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCTTGGGTC
TCCACATAACTTTTATATTGACATGCCTGGACAAGATAATAAACAAAGTGTTGATACTAA
TACTTCAGAGCCTATAGGCGAGACGGGTCATATGTGATTGCCATAATTTAATTTAAAGCG
AAAAATACAAGTTCATCCGCTTAAGTATGAGTTATATTTATGCATCCATAGGGTCAAGTT
ACTGTAATTGTATTGTAACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAAGCTCAC
CC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[39-329] 3.5E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[81-329] 1.1E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[107-307] 1.28E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[116-306] 2.3E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	179	9.96E-54