Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.C.nonSL4-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,051]

Sequences

Amino acid sequence

Length: 350

>KH.C7.55.v1.C.nonSL4-1
ETQMSKVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLVMAK
VNPLLHNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQLHPV
LFDTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSNSPL
WVKGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDFDEY
LENRNLSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSRCIL
DELEHKVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,199

>KH2012:KH.C7.55.v1.C.nonSL4-1
AGAAACTCAAATGTCTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAATAAGATTCAA
AATGAAGCTTTGTTGTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACAAAGTATTCA
AAGTCGAAATTCTCATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGTGATGGCTAA
AGTTAATCCACTTCTACACAACGTAACCATTCAAGAAGTTCCGAAGATATCAGATAAAAT
TCCTGTTTTTCGTCACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTATTTCTGTGTG
GCTGGACAACCTGCTTCACGCCAGACCACAATATAATTCTGTTGTTCAACTACATCCAGT
TCTATTTGATACACATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATGGCAGCAGGA
ATACAGAGAGGTTGACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACGAGGTAAAAA
GAAGCCATGGCCACAAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAATTCACCACT
TTGGGTAAAAGGTGGTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATTTTATGAACT
AAATCCAAATACGTTACTAGATGGCTTATTAATTGCTTTATCAATCAAACACATTCAAAA
TGATTTGATCATCATTGAATCAGCTCAAATTTCACAGGATATGCCCGACTTTGATGAATA
TTTAGAAAATCGAAATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGAGAATGAAAA
TATTTCTTATCTTGAACACTTAGCTGAAGATTCTAAACTTTTAAATATAATGCCTTTGTA
TGGTTTAAATGTTTGCAGTATTTTAAAACATGACAAACTTGTCCTATCCAGATGCATACT
AGATGAACTTGAGCACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCTTGGGTCTCC
ACATAACTTTTATATTGACATGCCTGGACAAGATAATAAACAAAGTGTTGATACTAATAC
TTCAGAGCCTATAGGCGAGACGGGTCATATGTGATTGCCATAATTTAATTTAAAGCGAAA
AATACAAGTTCATCCGCTTAAGTATGAGTTATATTTATGCATCCATAGGGTCAAGTTACT
GTAATTGTATTGTAACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAAGCTCACCC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[38-328] 3.5E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[80-328] 1.1E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[106-306] 1.27E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[115-305] 2.2E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	179	9.79E-54