Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.C.nonSL5-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,060]

Sequences

Amino acid sequence

Length: 353

>KH.C7.55.v1.C.nonSL5-1
IALETQMSKVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLV
MAKVNPLLHNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQL
HPVLFDTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSN
SPLWVKGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDF
DEYLENRNLSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSR
CILDELEHKVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,208

>KH2012:KH.C7.55.v1.C.nonSL5-1
GATAGCACTAGAAACTCAAATGTCTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAAT
AAGATTCAAAATGAAGCTTTGTTGTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACA
AAGTATTCAAAGTCGAAATTCTCATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGT
GATGGCTAAAGTTAATCCACTTCTACACAACGTAACCATTCAAGAAGTTCCGAAGATATC
AGATAAAATTCCTGTTTTTCGTCACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTAT
TTCTGTGTGGCTGGACAACCTGCTTCACGCCAGACCACAATATAATTCTGTTGTTCAACT
ACATCCAGTTCTATTTGATACACATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATG
GCAGCAGGAATACAGAGAGGTTGACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACG
AGGTAAAAAGAAGCCATGGCCACAAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAA
TTCACCACTTTGGGTAAAAGGTGGTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATT
TTATGAACTAAATCCAAATACGTTACTAGATGGCTTATTAATTGCTTTATCAATCAAACA
CATTCAAAATGATTTGATCATCATTGAATCAGCTCAAATTTCACAGGATATGCCCGACTT
TGATGAATATTTAGAAAATCGAAATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGA
GAATGAAAATATTTCTTATCTTGAACACTTAGCTGAAGATTCTAAACTTTTAAATATAAT
GCCTTTGTATGGTTTAAATGTTTGCAGTATTTTAAAACATGACAAACTTGTCCTATCCAG
ATGCATACTAGATGAACTTGAGCACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCT
TGGGTCTCCACATAACTTTTATATTGACATGCCTGGACAAGATAATAAACAAAGTGTTGA
TACTAATACTTCAGAGCCTATAGGCGAGACGGGTCATATGTGATTGCCATAATTTAATTT
AAAGCGAAAAATACAAGTTCATCCGCTTAAGTATGAGTTATATTTATGCATCCATAGGGT
CAAGTTACTGTAATTGTATTGTAACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAA
GCTCACCC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[41-331] 3.6E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[83-331] 1.1E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[109-309] 1.31E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[118-308] 2.3E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	178	1.33E-53