Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.C.nonSL6-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,039]

Sequences

Amino acid sequence

Length: 346

>KH.C7.55.v1.C.nonSL6-1
SKVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLVMAKVNPL
LHNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQLHPVLFDT
HPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSNSPLWVKG
GISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDFDEYLENR
NLSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSRCILDELE
HKVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,187

>KH2012:KH.C7.55.v1.C.nonSL6-1
GTCTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAATAAGATTCAAAATGAAGCTTTG
TTGTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACAAAGTATTCAAAGTCGAAATTC
TCATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGTGATGGCTAAAGTTAATCCACT
TCTACACAACGTAACCATTCAAGAAGTTCCGAAGATATCAGATAAAATTCCTGTTTTTCG
TCACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTATTTCTGTGTGGCTGGACAACCT
GCTTCACGCCAGACCACAATATAATTCTGTTGTTCAACTACATCCAGTTCTATTTGATAC
ACATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATGGCAGCAGGAATACAGAGAGGT
TGACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACGAGGTAAAAAGAAGCCATGGCC
ACAAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAATTCACCACTTTGGGTAAAAGG
TGGTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATTTTATGAACTAAATCCAAATAC
GTTACTAGATGGCTTATTAATTGCTTTATCAATCAAACACATTCAAAATGATTTGATCAT
CATTGAATCAGCTCAAATTTCACAGGATATGCCCGACTTTGATGAATATTTAGAAAATCG
AAATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGAGAATGAAAATATTTCTTATCT
TGAACACTTAGCTGAAGATTCTAAACTTTTAAATATAATGCCTTTGTATGGTTTAAATGT
TTGCAGTATTTTAAAACATGACAAACTTGTCCTATCCAGATGCATACTAGATGAACTTGA
GCACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCTTGGGTCTCCACATAACTTTTA
TATTGACATGCCTGGACAAGATAATAAACAAAGTGTTGATACTAATACTTCAGAGCCTAT
AGGCGAGACGGGTCATATGTGATTGCCATAATTTAATTTAAAGCGAAAAATACAAGTTCA
TCCGCTTAAGTATGAGTTATATTTATGCATCCATAGGGTCAAGTTACTGTAATTGTATTG
TAACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAAGCTCACCC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[34-324] 3.5E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[76-324] 1.0E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[102-302] 1.23E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[111-301] 2.2E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	178	1.22E-53