Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.C.nonSL7-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,056]

Sequences

Amino acid sequence

Length: 352

>KH.C7.55.v1.C.nonSL7-1
ALETQMSKVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLVM
AKVNPLLHNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQLH
PVLFDTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSNS
PLWVKGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDFD
EYLENRNLSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSRC
ILDELEHKVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,204

>KH2012:KH.C7.55.v1.C.nonSL7-1
GCACTAGAAACTCAAATGTCTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAATAAGA
TTCAAAATGAAGCTTTGTTGTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACAAAGT
ATTCAAAGTCGAAATTCTCATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGTGATG
GCTAAAGTTAATCCACTTCTACACAACGTAACCATTCAAGAAGTTCCGAAGATATCAGAT
AAAATTCCTGTTTTTCGTCACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTATTTCT
GTGTGGCTGGACAACCTGCTTCACGCCAGACCACAATATAATTCTGTTGTTCAACTACAT
CCAGTTCTATTTGATACACATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATGGCAG
CAGGAATACAGAGAGGTTGACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACGAGGT
AAAAAGAAGCCATGGCCACAAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAATTCA
CCACTTTGGGTAAAAGGTGGTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATTTTAT
GAACTAAATCCAAATACGTTACTAGATGGCTTATTAATTGCTTTATCAATCAAACACATT
CAAAATGATTTGATCATCATTGAATCAGCTCAAATTTCACAGGATATGCCCGACTTTGAT
GAATATTTAGAAAATCGAAATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGAGAAT
GAAAATATTTCTTATCTTGAACACTTAGCTGAAGATTCTAAACTTTTAAATATAATGCCT
TTGTATGGTTTAAATGTTTGCAGTATTTTAAAACATGACAAACTTGTCCTATCCAGATGC
ATACTAGATGAACTTGAGCACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCTTGGG
TCTCCACATAACTTTTATATTGACATGCCTGGACAAGATAATAAACAAAGTGTTGATACT
AATACTTCAGAGCCTATAGGCGAGACGGGTCATATGTGATTGCCATAATTTAATTTAAAG
CGAAAAATACAAGTTCATCCGCTTAAGTATGAGTTATATTTATGCATCCATAGGGTCAAG
TTACTGTAATTGTATTGTAACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAAGCTC
ACCC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[40-330] 3.5E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[82-330] 1.1E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[108-308] 1.3E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[117-307] 2.3E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	178	1.18E-53