Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.C.nonSL8-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,037]

Sequences

Amino acid sequence

Length: 345

>KH.C7.55.v1.C.nonSL8-1
KVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLVMAKVNPLL
HNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQLHPVLFDTH
PRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSNSPLWVKGG
ISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDFDEYLENRN
LSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSRCILDELEH
KVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,185

>KH2012:KH.C7.55.v1.C.nonSL8-1
CTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAATAAGATTCAAAATGAAGCTTTGTT
GTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACAAAGTATTCAAAGTCGAAATTCTC
ATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGTGATGGCTAAAGTTAATCCACTTC
TACACAACGTAACCATTCAAGAAGTTCCGAAGATATCAGATAAAATTCCTGTTTTTCGTC
ACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTATTTCTGTGTGGCTGGACAACCTGC
TTCACGCCAGACCACAATATAATTCTGTTGTTCAACTACATCCAGTTCTATTTGATACAC
ATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATGGCAGCAGGAATACAGAGAGGTTG
ACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACGAGGTAAAAAGAAGCCATGGCCAC
AAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAATTCACCACTTTGGGTAAAAGGTG
GTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATTTTATGAACTAAATCCAAATACGT
TACTAGATGGCTTATTAATTGCTTTATCAATCAAACACATTCAAAATGATTTGATCATCA
TTGAATCAGCTCAAATTTCACAGGATATGCCCGACTTTGATGAATATTTAGAAAATCGAA
ATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGAGAATGAAAATATTTCTTATCTTG
AACACTTAGCTGAAGATTCTAAACTTTTAAATATAATGCCTTTGTATGGTTTAAATGTTT
GCAGTATTTTAAAACATGACAAACTTGTCCTATCCAGATGCATACTAGATGAACTTGAGC
ACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCTTGGGTCTCCACATAACTTTTATA
TTGACATGCCTGGACAAGATAATAAACAAAGTGTTGATACTAATACTTCAGAGCCTATAG
GCGAGACGGGTCATATGTGATTGCCATAATTTAATTTAAAGCGAAAAATACAAGTTCATC
CGCTTAAGTATGAGTTATATTTATGCATCCATAGGGTCAAGTTACTGTAATTGTATTGTA
ACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAAGCTCACCC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[33-323] 3.5E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[75-323] 1.0E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[101-301] 1.23E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[110-300] 2.2E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	178	1.37E-53