Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.55.v1.R.ND1-1

Possible name(s)

MRPL4

Gene model

KH2012:KH.C7.55

Location

KhC7 [257,091 / 259,044]

Sequences

Amino acid sequence

Length: 348

>KH.C7.55.v1.R.ND1-1
QMSKVEAWFSKEAGIRFKMKLCCRKLISPARFILQSIQSRNSHVNREDFIPPNLVMAKVN
PLLHNVTIQEVPKISDKIPVFRHCVEKLPKNKNAISVWLDNLLHARPQYNSVVQLHPVLF
DTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRARHGSSNSPLWV
KGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQISQDMPDFDEYLE
NRNLSEASMLLVHAENENISYLEHLAEDSKLLNIMPLYGLNVCSILKHDKLVLSRCILDE
LEHKVLWHKTRYPWLGSPHNFYIDMPGQDNKQSVDTNTSEPIGETGHM

Nucleotide sequence

Length: 1,192

>KH2012:KH.C7.55.v1.R.ND1-1
CAAATGTCTAAAGTTGAGGCATGGTTTAGTAAGGAAGCTGGAATAAGATTCAAAATGAAG
CTTTGTTGTAGGAAACTCATTTCTCCTGCAAGATTTATTTTACAAAGTATTCAAAGTCGA
AATTCTCATGTTAATAGAGAAGATTTCATCCCACCAAATTTGGTGATGGCTAAAGTTAAT
CCACTTCTACACAACGTAACCATTCAAGAAGTTCCGAAGATATCAGATAAAATTCCTGTT
TTTCGTCACTGTGTTGAGAAATTGCCAAAGAATAAAAATGCTATTTCTGTGTGGCTGGAC
AACCTGCTTCACGCCAGACCACAATATAATTCTGTTGTTCAACTACATCCAGTTCTATTT
GATACACATCCTCGAATGGATATCTTGCATTCAGTGGTTCGATGGCAGCAGGAATACAGA
GAGGTTGACTATTCATGGTCCCGTACAAGAGCAGAAATTGGACGAGGTAAAAAGAAGCCA
TGGCCACAAAAAGGAACTGGAAGGGCAAGACATGGAAGTAGCAATTCACCACTTTGGGTA
AAAGGTGGTATTAGTCAAGGACCTAGAGGACCAAGGGCTTCATTTTATGAACTAAATCCA
AATACGTTACTAGATGGCTTATTAATTGCTTTATCAATCAAACACATTCAAAATGATTTG
ATCATCATTGAATCAGCTCAAATTTCACAGGATATGCCCGACTTTGATGAATATTTAGAA
AATCGAAATTTATCTGAGGCTTCAATGTTGCTCGTCCATGCTGAGAATGAAAATATTTCT
TATCTTGAACACTTAGCTGAAGATTCTAAACTTTTAAATATAATGCCTTTGTATGGTTTA
AATGTTTGCAGTATTTTAAAACATGACAAACTTGTCCTATCCAGATGCATACTAGATGAA
CTTGAGCACAAGGTACTGTGGCATAAAACACGTTATCCTTGGCTTGGGTCTCCACATAAC
TTTTATATTGACATGCCTGGACAAGATAATAAACAAAGTGTTGATACTAATACTTCAGAG
CCTATAGGCGAGACGGGTCATATGTGATTGCCATAATTTAATTTAAAGCGAAAAATACAA
GTTCATCCGCTTAAGTATGAGTTATATTTATGCATCCATAGGGTCAAGTTACTGTAATTG
TATTGTAACGGACACCAAAGTGAGCTATAAGACTCAAAGTTGAAGCTCACCC

InterProScan

PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[36-326] 3.4E-67
Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[78-326] 1.0E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[104-304] 1.26E-46
Pfam	Ribosomal_L4/L1e (IPR002136) - T[113-303] 2.2E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	39.241 %	178	1.18E-53