- Clone 'AHC0AAA186YO11' >
- Molecular Tool 'cilv18l17-MO' >
- Transcript 'KH2012:KH.C4.506.v1....' >
- Transcript 'KH2012:KH.C7.628.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.628.v1.A.SL1-1
Possible name(s)
TBX1; TBX10; TBX20
Gene model
Location
KhC7 [1,979,016 / 1,985,224]
Amino acid sequence
Length: 402
>KH.C7.628.v1.A.SL1-1
KKNPIRGPMSAQIAVGHHSYNSMLSQPGPTDASCITVHGSDHSGNLPSINRVHLTPINQS
KHTGHASNFDNYIHYQHDNGYYGRTGKRDGHSPAHVYPDYGKTSVHSTHCGFGSVEEKMS
VNFAEKTDETSQDEVTRKYSSPPSYDVPVTSDLRTFENAVSNLSKRPLGASPEMTIANDS
PVTSMVQSQDPRQKNERLVAVEAKLEMKSLWDEFNDLGTEMIVTKAGRRMFPTFQVKVFG
LDVNSEYILMMDFTPVDDKRYRYAFHTSSWSVAGKADAAMPPRIHVHPDSPAKGGHWMKQ
IVSFDKLKLTNNLLDDNGHIILNSMHRFQPRFHVVLVDNSHDSVQRAEENFKTFVFDETK
FTAVTAYQNHRVKHVCLDAIFINPLTAAVTFDYQQLQLNKKL
Nucleotide sequence
Length: 1,609
>KH2012:KH.C7.628.v1.A.SL1-1
AAATACGACCAGTTTATCAAGTAGTTTAAAAGAAAACGTGCTAATCATTTAATGTTCGTT
CCTGCTAAGCTTTGCATTTAAAAAAAGAACCCAATCCGCGGGCCCATGTCTGCCCAAATT
GCAGTCGGTCACCATAGTTATAACTCAATGCTCTCGCAGCCTGGACCGACTGATGCTTCC
TGCATCACAGTGCATGGCAGCGACCACTCCGGCAACCTACCTAGTATTAATAGGGTACAC
CTGACCCCTATAAACCAAAGCAAGCATACCGGCCACGCGAGTAATTTTGATAACTATATT
CACTACCAGCACGATAACGGGTATTATGGACGTACCGGTAAACGAGATGGTCATTCTCCA
GCACACGTTTACCCAGATTACGGCAAAACATCGGTGCATTCGACACATTGCGGCTTCGGC
TCCGTGGAGGAGAAAATGAGCGTAAATTTTGCCGAGAAGACCGACGAAACGTCACAAGAC
GAGGTTACAAGAAAATACAGCTCGCCACCTTCCTATGACGTTCCCGTAACTTCAGATCTC
CGAACTTTCGAGAACGCAGTTTCAAATCTGAGCAAGCGTCCACTTGGTGCTTCACCGGAA
ATGACGATTGCGAATGATTCGCCAGTGACGTCAATGGTGCAATCGCAAGATCCGCGGCAA
AAGAACGAAAGATTGGTGGCCGTGGAAGCAAAACTGGAAATGAAATCTCTGTGGGATGAA
TTCAACGATCTCGGTACTGAAATGATTGTAACAAAGGCGGGAAGACGCATGTTTCCAACA
TTCCAAGTCAAAGTGTTCGGACTCGATGTCAACAGTGAATATATTTTAATGATGGACTTC
ACACCAGTTGATGATAAAAGATATAGATACGCGTTTCACACATCAAGTTGGTCGGTGGCT
GGGAAAGCGGACGCAGCAATGCCACCTCGTATTCATGTTCATCCAGACTCGCCAGCAAAA
GGAGGACATTGGATGAAACAAATCGTATCTTTCGATAAACTCAAACTTACGAACAATTTA
CTCGACGACAATGGACACATCATACTCAACTCCATGCACCGCTTCCAACCTCGGTTTCAT
GTTGTGCTGGTGGACAACAGCCATGACAGCGTGCAACGAGCAGAGGAAAATTTTAAGACT
TTCGTTTTTGATGAGACCAAGTTCACAGCAGTCACAGCTTATCAAAATCACAGGGTAAAA
CATGTATGTTTAGACGCTATTTTTATAAATCCCTTGACTGCAGCAGTCACGTTCGATTAC
CAGCAATTGCAATTGAATAAAAAGCTATAGTTTTTAACTTTTTCAACACGGGTTGTGTAT
AAAATGGTTTAAACATGGGTTGCGTATATAAAACTTTTTTTATCTACCAAAGGTAGCGTT
TACAGATTCTTTTGTTTCCAATGCAAACATCATATAACGAGGTTTCTATAGCCAAGTAAA
CATCTCGACAGTTGATATTTCAGGCTCACGTTCCTATTCTAAACGTTTTCAATTATGGAT
AACAATAGAATATATGTCGCGTGTATTAAGGTTTATGTTGTCACAGCAAACAATTCAATG
ACGTGTGTAAATTCGACAGAATAAAAAGAAAGACCAGCTGTTTTCTTAA
| PANTHER |
TF_T-box (IPR001699) - T[159-375] 9.4E-115 |
| Gene3D |
T-box_sf (IPR036960) - T[187-384] 1.7E-81 |
| SMART |
TF_T-box (IPR001699) - T[200-390] 1.2E-92 |
| CDD |
TF_T-box (IPR001699) - T[201-373] 3.31823E-98 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[201-374] 2.73E-66 |
| Pfam |
TF_T-box (IPR001699) - T[204-375] 1.4E-66 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[205-375] 64.464 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[210-229] . - T[286-304] . |
| PRINTS |
TF_T-box (IPR001699) - T[218-242] 1.3E-37 - T[285-298] 1.3E-37 - T[302-311] 1.3E-37 - T[321-335] 1.3E-37 - T[359-372] 1.3E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX20_HUMAN | 54.211 % | 230 | 3.14E-71 |
| TBX1_HUMAN | 77.528 % | 303 | 2.06E-100 |
| TBX10_HUMAN | 72.527 % | 296 | 7.27E-98 |