- Transcript 'KH2012:KH.C7.67.v1.C...' >
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- Transcript 'KH2012:KH.C7.67.v1.C...'
Transcript Model
Transcript Id
KH2012:KH.C7.67.v1.C.nonSL2-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC7 [4,012,276 / 4,014,936]
Amino acid sequence
Length: 308
>KH.C7.67.v1.C.nonSL2-1
FIMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG
DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKAN
REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTAEREIVRDIKEKLCYVALDFEQEMAT
AASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDI
RKDLYANNVLSGGTTITMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP
SIVHRKCF
Nucleotide sequence
Length: 992
>KH2012:KH.C7.67.v1.C.nonSL2-1
ATCAGTTCTGTATACTCGTCTTAGTTACATCATCAACCAAGAAAAACTAACTCTAGTTCA
TTATGTCTGATTCCGAAGAAGACCAAACCGCTCTTGTGTGCGATAATGGATCTGGTTTGG
TAAAGTCCGGCTTTGCTGGTGATGACGCACCAAGAGCTGTTTTCCCCTCAATCGTTGGTC
GGCCCCGTCATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACAGCTACGTTGGTGACG
AAGCACAAAGCAAGCGAGGTATCTTAACCCTGAAATATCCAATCGAGCACGGTATCATCA
CCAACTGGGACGACATGGAAAAAATTTGGCATCACACTTTCTACAACGAGCTCCGTGTTG
CTCCCGAAGAACATCCGACTCTTCTAACCGAAGCCCCACTTAACCCAAAGGCTAACCGAG
AAAAGATGACCCAGATCATGTTTGAAACCTTTAACGTACCTGCTATGTATGTCGCCATCC
AAGCTGTGCTCTCCCTCTACGCATCTGGTAGAACTACAGCTGAACGAGAAATCGTTCGAG
ACATCAAAGAAAAACTTTGCTATGTCGCTCTTGACTTTGAGCAAGAGATGGCGACCGCTG
CGTCGTCAACTTCCTTGGAAAAAAGCTACGAACTTCCCGATGGTCAAGTTATCACTATTG
GAAACGAACGATTCCGATGCCCGGAGACTCTTTTCCAACCATCGTTTATCGGTATGGAAT
CTGCTGGTATCCATGAGACAACCTACAACTCCATCATGAAGTGCGACATTGACATCCGAA
AGGATCTTTACGCCAACAACGTCCTCTCCGGAGGTACAACCATCACCATGAAGATCAAGA
TCATTGCTCCTCCAGAGAGGAAATACTCCGTCTGGATCGGAGGATCCATCCTCGCTTCTC
TCTCCACCTTCCAACAGATGTGGATCACCAAGCAAGAATACGACGAAGCCGGCCCATCTA
TTGTCCACCGAAAATGTTTTTAATTTATAAAC
| PANTHER |
Actin (IPR004000) - T[7-154] 2.8E-200 - T[153-307] 2.8E-200 |
| Pfam |
Actin (IPR004000) - T[9-155] 1.0E-54 - T[258-308] 5.5E-23 |
| SMART |
Actin (IPR004000) - T[10-308] 3.2E-152 |
| PRINTS |
Actin (IPR004000) - T[31-40] 1.1E-35 - T[54-65] 1.1E-35 - T[66-88] 1.1E-35 - T[120-133] 1.1E-35 - T[145-164] 1.1E-35 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[58-68] . - T[289-297] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[109-121] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 77.273 % | 569 | 0 |
| ACTS_HUMAN | 77.273 % | 570 | 0 |
| ACTC_HUMAN | 77.249 % | 569 | 0 |