Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C7.715.v1.A.ND1-1

Possible name(s)

VPS37A; VPS37B; VPS37C

Gene model

KH2012:KH.C7.715

Location

KhC7 [4,936,819 / 4,939,246]

Sequences

Amino acid sequence

Length: 280

>KH.C7.715.v1.A.ND1-1
APVQFYNQKVVNTCTSFTFASNTRISFAMSQWSYNQYSHHGNRPAPNPKDEDDFSELLED
ASKDELQMLIDNEDKILEIVMDDKKVKDMKMDNVMQQASNRSIADDNISKEPHLTQLRDA
LAEKYETLKQLNDTFLLNQAKLESLQKDTNLETTLAVLQTTCAQTEEESEELAEAFFAGN
LSIGEFLTQFKAKRMLAHNRHIKTDKMKELVLEVQRQTSTPAVPPRNQPTNQTPAYPGSS
RSASHHTPYSSGYGVPQQGKYPGTSFNQPTGQQYPGFNWK

Nucleotide sequence

Length: 1,527

>KH2012:KH.C7.715.v1.A.ND1-1
ATACGGCAACACTGTACGTTTTTATCACATGATAATCGGAATTCTTCGGAGATATTCGGA
TTTATCCTGAGCCCCTGTTCAATTTTATAACCAAAAAGTTGTAAACACTTGTACGAGTTT
TACATTTGCCTCGAATACGAGAATATCATTTGCAATGTCACAATGGAGCTACAACCAATA
CAGCCACCATGGTAATCGTCCTGCACCAAATCCAAAAGATGAAGACGACTTTTCTGAACT
CCTGGAAGATGCATCTAAAGACGAACTGCAAATGCTGATTGACAATGAAGATAAAATACT
AGAAATAGTAATGGACGATAAAAAGGTTAAAGACATGAAGATGGATAATGTAATGCAGCA
AGCATCAAACAGGAGTATTGCAGATGATAATATCAGTAAAGAACCTCATCTTACCCAGCT
GAGAGATGCTTTGGCAGAAAAATATGAGACATTGAAACAACTGAATGATACTTTCTTACT
AAACCAAGCAAAATTAGAATCACTTCAAAAAGACACAAACCTGGAAACAACTCTTGCTGT
CCTTCAAACAACATGTGCACAAACTGAGGAAGAATCAGAGGAACTGGCAGAAGCATTTTT
CGCTGGAAATCTTTCAATCGGAGAATTCCTTACTCAGTTTAAAGCTAAACGAATGTTGGC
ACACAACCGACACATTAAAACTGATAAAATGAAAGAATTAGTCTTGGAAGTACAAAGACA
AACCTCCACGCCAGCAGTGCCACCGAGGAACCAGCCAACCAACCAAACTCCAGCTTATCC
CGGCTCTTCAAGGAGTGCCTCCCACCACACCCCATATTCTAGTGGGTATGGAGTACCACA
ACAGGGGAAGTATCCGGGAACCAGTTTCAACCAACCAACAGGACAACAGTACCCAGGATT
TAATTGGAAGTGAAATAAAGATTTTAGAAATATGGAATCTTTCTCTTGAGTAATAGTTCC
AGTTCCCACTGAATTGGTTGAATTATTGAGAGAAAATTATTAAGATGTCAACAAAAGTGA
AAACCAAACAATTCAAACTCTTAACGCTGGTGATGAAATATGTTATTTCAAAAATTCCAA
AGAAATATTTCAACTCGTTACATGAAAGATCATAGCAACTTGTTGTTGTAGAATTCTGGT
AGAAAAAAATAGGAAAATTAACATTTTGTCTGCCTTTTATATGTAACAATGGAATTTAGT
GATGTTATAGTAAGGTTTACGACAGCACAATTAAGCTTCTCTATTCTTATTTCTTGTCTT
TATGTGCTCTTGAATTATATTTGTTATTGTACTACACTTACTATGACCACCATACACTTC
CATTAAAAATCATTTCCTTGCTTGCTTTGCTGTTTGGATAAGGTGGCTTAGAGTTTAAAC
AGGTCCATAATTAAAATGTAACAAGATAGTTTTAAAATTTACTGTTACAATTTTGCAAAA
GTAAAACCACACACAAGTTTGTGTGCTGGATAAAAATGCTGCGGTGTTAGCACACTACGT
ACTCACTGCCTACCATACATGTAACAT

InterProScan

PANTHER	Vps37 (IPR037859) - T[29-251] 3.2E-79
Pfam	Mod_r (IPR009851) - T[60-203] 1.1E-31
ProSiteProfiles	Mod_r (IPR009851) - T[132-221] 21.265

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VP37B_HUMAN	34.426 %	107	1.04E-27
VP37C_HUMAN	32.051 %	95.9	6.97E-23