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  1. Transcript 'KH2012:KH.C8.104.v2....'

Transcript Model

Transcript Id

KH2012:KH.C8.104.v2.A.nonSL6-1

Possible name(s)

OTUD7B; TNFAIP3; ZRANB1

Location

KhC8 [5,009,989 / 5,020,024]

Sequences

Amino acid sequence

Length: 829

>KH.C8.104.v2.A.nonSL6-1
LTNASSIISYIVIFQVNMSKTEKRWSCPSCTYDNYSASSKCSVCLFPRVPEVIRPPPPNQ
DAGLLIESFSDFSDTKDNEHQLIICPSDALRKPGKHKSNSTEDVKKEETGSSSELAKFVE
EESSKKRNDINVNTDLAEQPWFCGACTFINSPQHTLCSKCRTSKDSTSPSGASAKGATAS
NSEAATEDNNTKNRKWTCAVCTYINWCSSKMCVMCQNPQPLSNARIVSDIENVSLHTEVQ
TLSSQPCTSSNYLLETTQASTTSCSDSLPEIEVSSEKGDQEKYSPEKLPINSDHLLENIR
SRSSSSSSSNSHSPREEQQAQATPKSRSRRQRRQNQDNQACSSRSITNNGQRGTACGGNL
SRSMSSSHLPSSRLEILDNRSMKTRSRNQNWLFLKACIGVVEENAEAVDAYLANGGNIAR
TLTLDEVNLLNRPSAFDVGHTLVHLAIRFQRHGILALLLNPEIAPRGFKRNPAHLSPQIA
DLIRREIMASLRTRKGDFHCRFLSEFTTFQLPIEICDLPPTIQKLLFNELLDQNVQKELE
EECAINWSPSLMHTGDCNSRLYALWNRSAGDCLLDSVLQATWGVFDRDNVLRSAMSESLQ
DCATSFFRRWREWEQYQAQLLGFTFTERQCLQDWAFINSLAQQPGAALEHCHIFVLAHIL
RRPIIVYGIKYLKSYRGDTLGFAKFQGVYLPFLWDQVFCYTSPIALGYTRGHFTALVTME
NDSKDICAGAQHRNQTYNTIKHLPLVDSDGKVLPIHFTLRGQGVSEDQRKEILKEWLDCH
VTDEGWLVARQRLGKRPPSVTRLLDEWLDHYRHMSFRRLGEEGHSDAED

Nucleotide sequence

Length: 3,583

>KH2012:KH.C8.104.v2.A.nonSL6-1
ACAAGGGAGTGAAGGACAAACAAATACAGCGAGGCGAAGAGGATCTCGTTTTGCTGGATG
ACGATGCAAGGATTATTCGTAGCCGGTCTGTGTAAACGAACACAACGTTATATTTGTTGT
TTAGGTTTAGTTATAAGCGTATTTTATGTGTTTAGCCAGAAAGGACCAGTTTTGCGCGAA
TAAATTCTCAGTTGCCATCAGTGTTATATTCAATATACTATTCTATATTTGCATGACGCA
ATCTGTTGTCAATTTCAGTCTATATCTGTAGCAATGTATTGCAGTCGCTTTGGTGTTAAT
CTGTTTATTATTAAATAATAGCATATCATTAGAAAACTATAAAACTAAAGTTACAACTAA
TTTAACTAACTAATGCTAGTAGTATTATATCCTATATAGTTATTTTTCAGGTTAATATGA
GTAAAACAGAAAAACGATGGTCTTGCCCTTCATGTACGTACGATAATTACTCAGCTTCTT
CTAAGTGTTCTGTTTGTTTGTTTCCAAGAGTCCCAGAGGTTATCCGTCCCCCTCCTCCAA
ATCAAGATGCAGGTTTACTCATTGAGAGCTTTTCTGACTTCTCTGACACAAAAGATAACG
AACATCAGTTAATTATTTGTCCTTCTGATGCTTTACGAAAACCTGGGAAACATAAAAGCA
ACTCAACAGAGGATGTTAAAAAGGAAGAAACTGGAAGTTCTTCGGAATTAGCAAAATTTG
TAGAGGAAGAATCATCCAAGAAGAGAAATGACATAAATGTCAATACAGATCTGGCAGAAC
AACCATGGTTCTGTGGAGCTTGCACATTCATAAACTCTCCTCAGCATACATTGTGTTCTA
AATGCCGAACATCTAAAGATAGCACTTCCCCTAGTGGTGCTAGTGCAAAGGGAGCCACTG
CTTCCAATTCTGAGGCAGCTACAGAAGACAACAATACTAAAAACCGCAAATGGACTTGCG
CAGTCTGCACATATATAAACTGGTGCTCTTCGAAAATGTGCGTTATGTGTCAGAATCCTC
AACCTTTGAGCAATGCCAGAATTGTAAGTGATATAGAAAATGTTTCTTTACACACTGAGG
TACAAACCTTGTCATCCCAACCTTGCACCTCTTCCAACTATCTTCTTGAAACTACACAAG
CAAGCACAACCTCATGCTCTGACTCTTTACCTGAAATTGAAGTCTCATCTGAAAAGGGAG
ACCAAGAAAAATATTCTCCGGAGAAGCTACCAATAAACAGTGACCACCTTTTAGAAAACA
TAAGGTCCAGGTCCTCCAGTTCGTCAAGTAGTAACTCACATTCACCACGAGAGGAACAAC
AAGCTCAAGCCACCCCAAAGTCCAGAAGTCGGAGACAAAGAAGACAAAATCAAGATAATC
AGGCTTGCTCATCGCGATCTATTACCAACAATGGTCAGCGTGGCACTGCTTGTGGTGGTA
ACTTATCACGCAGTATGTCATCAAGCCACTTGCCTTCATCACGACTTGAAATTCTTGACA
ACCGTTCAATGAAAACAAGATCGCGCAACCAAAACTGGCTGTTTCTAAAGGCATGCATCG
GAGTGGTTGAAGAAAATGCAGAAGCAGTCGATGCTTACTTAGCAAATGGTGGAAATATTG
CTCGTACATTGACTTTAGATGAAGTCAATTTACTCAACCGACCTTCTGCGTTTGATGTCG
GTCACACACTAGTACACCTTGCCATTAGGTTTCAAAGACACGGGATTCTAGCTCTCCTTC
TTAACCCAGAGATTGCACCAAGGGGGTTTAAACGCAATCCAGCCCATCTTAGCCCACAAA
TCGCTGATCTTATTCGACGTGAGATTATGGCAAGCCTACGAACTCGGAAAGGAGATTTTC
ATTGCAGATTTCTCTCAGAATTCACCACTTTTCAGCTCCCTATAGAAATATGTGATTTAC
CTCCAACTATACAAAAACTTCTGTTTAATGAACTGCTGGATCAAAATGTTCAGAAAGAAC
TGGAAGAGGAATGTGCTATTAACTGGTCCCCTTCCCTCATGCACACTGGCGACTGCAACA
GCCGGCTCTATGCACTCTGGAATCGCTCGGCAGGCGACTGTTTGCTTGACTCTGTGCTAC
AAGCAACATGGGGGGTGTTCGACCGCGACAATGTCTTACGTTCTGCAATGTCTGAGAGTT
TGCAGGATTGCGCAACAAGTTTTTTTCGTCGTTGGCGGGAATGGGAGCAATATCAAGCAC
AACTACTCGGGTTCACTTTCACAGAGCGACAGTGCCTACAGGACTGGGCTTTTATCAACT
CACTCGCACAGCAGCCTGGTGCTGCATTAGAACATTGTCATATCTTTGTACTTGCTCATA
TTCTAAGACGTCCCATAATCGTGTATGGAATTAAATACCTGAAGAGCTACAGAGGGGACA
CACTGGGTTTCGCAAAATTTCAAGGTGTTTATCTTCCCTTTTTATGGGATCAGGTGTTCT
GTTACACAAGCCCAATAGCACTTGGATACACACGTGGCCATTTTACAGCTCTTGTTACAA
TGGAAAATGATAGCAAGGACATTTGTGCTGGAGCCCAACATAGAAATCAAACATACAACA
CAATCAAGCACCTCCCACTGGTAGATAGTGATGGGAAGGTTTTGCCGATCCACTTCACTC
TGAGGGGGCAGGGTGTAAGTGAAGATCAAAGGAAAGAAATCTTAAAAGAATGGCTTGATT
GTCATGTGACAGATGAGGGTTGGTTGGTTGCTAGGCAACGACTCGGAAAGCGACCTCCAT
CGGTGACGAGATTGTTGGATGAATGGCTTGACCATTACCGACACATGTCTTTTCGAAGAT
TGGGAGAAGAAGGGCATTCGGATGCGGAAGATTAGAAGCCATGTTTTATGGGAGTTTCAA
AATTCAAGAGTTTGGGTTTCCGTATTTTTTACTGAATAGTCAAGTTTTTGTCAGTGCTGG
TTTATGTTTTGTGTTCCACTTTGTGCTTTCAATAAGTTTCTATTGTCCTGTATTGGTTAC
ATGAGTAATTATGTGTGATTGGGTTGTCTGACTGTTCTGACACTCATTCTACTGCTGTGT
CCTCTCAAATAATAATGCATTGTGCCAAAAACAGTTTTTGGCAGAAATGCATATAACGTG
CGCATGCAAAAAATGGGCAAATGCGGAATTATTAAAAAAATATTTAGGACAATTTCTGTC
ACAATCTTAACTCATACTAACCACACAGTTAAAACAATAAGAACTTTATATTATAAAAAT
GAAATGGTTTAAAATTGCATTGGTTTGTGCTAATGCTGTGGATTGTTATTCGTTCACTGT
GATGTCTTGTAGCTGCCACTAATATTTATATAACCATAAAAATACCGAGATTTGGTTACA
ATTGCCTAAGAGCAGATTTCTACCGAAATGACAATTTTTACCTGTCTAAGGCAAACAGAC
AACTTCCTATGGAAACATTTTATTGTACAGTTGTCTGATTTAATTGTTTTTTCTATTTGA
ATAATCTTGCATCTTGAAAAAGACACCGAGGCTGAGATTTCTTGTCTGTGCAAATCACTG
TTACATTGGAGACTTTGCTCATAATACATTGTTCTGTATATTC

InterProScan

SUPERFAMILY
Znf_RanBP2_sf (IPR036443) - T[21-48] 4.12E-5 - T[138-164] 6.12E-6
ProSiteProfiles
Znf_RanBP2 (IPR001876) - T[21-50] 9.145 - T[137-166] 8.411 - T[192-221] 8.987
Pfam
Znf_RanBP2 (IPR001876) - T[22-48] 3.4E-7
SMART
Znf_RanBP2 (IPR001876) - T[23-47] 1.3E-5 - T[139-163] 0.053 - T[194-218] 0.0027
ProSitePatterns
Znf_RanBP2 (IPR001876) - T[25-44] . - T[141-160] . - T[196-215] .
ProSiteProfiles
OTU_dom (IPR003323) - T[561-719] 12.765
Pfam
OTU_dom (IPR003323) - T[567-713] 5.5E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZRAN1_HUMAN 44.382 % 533 9.4E-180
TNAP3_HUMAN 29.755 % 126 7.03E-30
OTU7B_HUMAN 29.653 % 126 7.84E-30





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