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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L53.12.v1....' > 
  2. Transcript 'KH2012:KH.C8.109.v2....'

Transcript Model

Transcript Id

KH2012:KH.C8.109.v2.A.nonSL5-1

Possible name(s)

RPL18A

Gene model

KH2012:KH.C8.109

Location

KhC8 [5,233,696 / 5,235,762]

Sequences

Amino acid sequence

Length: 172

>KH.C8.109.v2.A.nonSL5-1
LQEYKVVGRKLPSEAVPNPPLYRMRLFAPNHIAAKSRFWYYISYYKKIKKNAGEILQCSK
RSEPRPGRVKNFGIWLRYDSRSGTHNMYREYRDVKVASAVTACYRDMGARHRARPGSIQI
MRVEEVAANKCKRKHVQQFHDSKIKFPMRRTVLSKKQQNAPRFTTNKPNLFF

Nucleotide sequence

Length: 581

>KH2012:KH.C8.109.v2.A.nonSL5-1
TTATACTAACCCCAATGTAATTTTAGCTCCAAGAATACAAGGTTGTTGGGCGTAAACTGC
CATCCGAGGCAGTCCCCAACCCACCTTTGTACCGAATGCGATTATTTGCTCCAAACCACA
TCGCTGCCAAATCAAGATTCTGGTATTACATTTCTTACTACAAGAAGATTAAGAAGAATG
CCGGTGAGATATTGCAATGTAGCAAGCGATCCGAACCACGACCTGGTCGTGTCAAGAACT
TCGGTATTTGGTTGAGATACGATTCTCGCAGTGGAACTCACAACATGTACAGAGAGTACC
GTGATGTGAAAGTAGCAAGTGCTGTTACCGCTTGTTACCGAGACATGGGTGCTCGCCATC
GTGCCAGACCTGGCTCCATTCAAATCATGAGAGTGGAAGAAGTGGCTGCTAATAAATGCA
AGCGAAAGCATGTTCAACAGTTCCATGATTCCAAGATTAAATTCCCCATGCGAAGAACTG
TATTGAGCAAAAAGCAGCAGAATGCACCGCGTTTCACAACCAACAAACCAAACCTGTTCT
TCTAAGAATTGAGCAGAAATAAAACAACTTTATGAAATTGT

InterProScan

PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[1-172] 8.3E-81
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[1-124] 1.6E-50
PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[1-172] 9.6E-67
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[24-124] 35.463

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 68.605 % 249 7.56E-86