Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.138.v2.A.SL2-2

Possible name(s)

LASP1; NEB; NEBL

Gene model

KH2012:KH.C8.138

Location

KhC8 [1,758,106 / 1,760,329]

Sequences

Amino acid sequence

Length: 338

>KH.C8.138.v2.A.SL2-2
SMPETEEEKKKRWAQAAARSAYMTPAMVHALKMSKQQSRNKYTEQFNKTKAKFTPVASTP
ELDNAKRQSSLVSRTQYRSEFEKSKAKFTQIADDPETLRVSKVSKQISNLSYTGKGAAKP
RKRNPASTRDRSSTPRETIEIKTEEPVSTPVIPDSAPVPENTTRDSDDQVSEVKEFENYD
DRSEDAEAETPETNQNNLETQENTAVEENETQEVTLPQNGDSNGENTEEYSGNGLGEPAP
EDPVDVEPEQKAEAVPIETEEENIYDQAADYADDTIQQNQSYDTNEYNNNQEAEYTEAGG
HDNSTQEAVYDDPEELKQPEPAEEEEGGNLDDFYANLE

Nucleotide sequence

Length: 1,489

>KH2012:KH.C8.138.v2.A.SL2-2
TAAGAAAGTTATTTTTACATATTCAACTGTCACGGTAAATTCTGCTGAAGCATGCCTGAA
ACCGAGGAAGAAAAAAAGAAAAGATGGGCACAAGCTGCTGCCCGCAGCGCTTATATGACC
CCAGCAATGGTACACGCATTGAAAATGTCCAAACAACAAAGCCGGAACAAATACACCGAA
CAGTTCAATAAGACAAAGGCAAAATTCACGCCTGTTGCATCGACCCCGGAATTGGATAAC
GCTAAACGACAAAGCTCCCTGGTCAGCCGGACACAGTACAGAAGCGAATTTGAAAAAAGC
AAAGCTAAATTTACTCAGATAGCTGACGACCCGGAAACTCTGCGCGTGAGCAAAGTGAGT
AAACAGATCAGTAACCTGTCTTACACTGGCAAAGGTGCAGCGAAACCACGCAAAAGAAAT
CCAGCTTCTACGAGAGATCGAAGTAGTACCCCGAGAGAAACAATAGAAATCAAGACCGAG
GAACCTGTTTCAACGCCCGTTATACCTGATTCCGCTCCGGTACCCGAGAATACAACACGT
GATAGTGATGATCAGGTATCAGAAGTAAAAGAGTTTGAAAACTACGATGATCGGTCGGAA
GACGCAGAAGCCGAAACGCCTGAAACAAACCAAAACAATTTGGAAACACAAGAGAATACC
GCAGTGGAGGAAAATGAAACACAGGAAGTTACACTGCCACAAAACGGGGACAGTAATGGC
GAAAACACCGAAGAATATTCAGGTAACGGTCTTGGGGAACCGGCGCCAGAAGATCCGGTA
GATGTCGAACCAGAGCAGAAAGCGGAAGCAGTGCCGATCGAAACTGAAGAGGAAAACATA
TACGACCAAGCAGCAGACTATGCCGATGATACTATCCAACAAAATCAGAGCTATGATACC
AATGAATACAACAACAACCAGGAGGCCGAATACACTGAGGCGGGTGGGCATGATAATTCA
ACCCAAGAAGCTGTATATGATGATCCGGAAGAGCTTAAACAGCCAGAGCCTGCCGAAGAA
GAAGAAGGCGGAAACTTAGATGATTTTTACGCGAATCTTGAGTGACAGCTTGGCTAATTC
TTCTGTAAACATCCAAACTGGATAAGCCATGTAGTTGGCAAAATTTGCCCAATTTCACTC
ACTATAACGGACAAATGAAAGGAAGTGTAAATACCGACAAAGATGTTTTAAGTATGGAGT
TAGCCCAATGCACTTGGTTGTAGACAGAGTGTATAATAGTGTCAGTTAAAACGACCATTC
ATAAATTGAGTTTTTATCCAGTAGTTTTTAAATTGCACTTCCTATTTCGTTCTTGTGTTT
TTAAACTGCTGCCTTTATACAGCATCCTAAGGCAATATACCATGCGCTATGTATAATTCA
CTGTAACTGATTATAACTATATTGCGAATATATAGCGCTGTAAATACTCTGCGCATCTGA
GGCAAACGTATTACGCGGAAAACATTATAAATAAATCAGATGCCATTGC

InterProScan

SMART	Nebulin_repeat (IPR000900) - T[18-48] 0.0017 - T[53-83] 0.28 - T[88-118] 0.14
Pfam	Nebulin_repeat (IPR000900) - T[23-51] 8.5E-9
ProSiteProfiles	Nebulin_repeat (IPR000900) - T[24-51] 8.468 - T[52-86] 12.726 - T[87-112] 7.841

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value