Aniseed - Transcript Card

Transcript 'KH2012:KH.C8.169.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.169.v1.A.nonSL3-1

Possible name(s)

AC092073.1; PDCD2; PDCD2L

Gene model

KH2012:KH.C8.169

Location

KhC8 [1,556,777 / 1,560,358]

Sequences

Amino acid sequence

Length: 349

>KH.C8.169.v1.A.nonSL3-1
KLRDTKQIKMELGFVEEPENTWRLLRCYFPSKVGGKPAWLDPEHLPSVDDMECGCCHKPL
VFLLQLYSPNDDKLDSFHRTIFVFCCTNGTCYSSENDAFPFKVFRSMLPKENDYYPADPP
DYDEPNAIRECSQFTNLCGLCGNHGVKKCSRCREVQYCSKDHQVFHWKLLHKYQCSKPKD
ENNEVEMEKSILFSEKELVIEPEPTAPKKENTESEFENLKNHIQSGDYTEEELNDAVANV
KSDKAFEKFQKQIAVEPEQVIRYQREGSVLWCSSENIPSKIPSCECGAQRQFEFQIMPQL
LNHLKVDHSIEGPTIDWGTVAIYTCHDDCNISPYIKEYCWLQHFSKEAI

Nucleotide sequence

Length: 1,449

>KH2012:KH.C8.169.v1.A.nonSL3-1
ATACGAAGAACAGAAAACGTGAGAAGTCCGAAACAAAATCCATATAATAGATATATACTG
GACTAACTATAGTTCCTAGTTTTTGAAAGTTACGAGATACTAAACAAATAAAGATGGAGT
TGGGATTTGTAGAAGAGCCTGAAAATACATGGCGACTGCTGCGTTGTTACTTCCCCAGTA
AAGTTGGTGGGAAGCCAGCGTGGTTGGATCCCGAACATTTACCTTCAGTAGATGACATGG
AATGTGGGTGCTGCCACAAACCGTTGGTGTTTCTACTTCAACTGTATTCCCCAAATGATG
ACAAGTTAGATTCTTTCCATCGCACAATATTTGTCTTCTGCTGCACCAACGGGACATGCT
ACAGCAGTGAAAATGACGCTTTTCCTTTCAAAGTGTTTCGGTCCATGTTACCAAAAGAGA
ATGATTATTACCCTGCTGATCCACCAGATTATGATGAACCAAATGCCATCAGAGAATGTT
CGCAGTTCACAAATTTGTGTGGGTTGTGTGGCAACCATGGTGTGAAGAAATGTTCGCGCT
GTAGAGAAGTTCAATACTGTTCGAAAGATCATCAAGTTTTTCATTGGAAGTTATTACATA
AGTATCAATGCAGTAAACCAAAGGATGAAAATAATGAAGTTGAAATGGAAAAATCGATCC
TGTTTTCAGAAAAAGAATTGGTGATTGAACCTGAGCCTACAGCACCCAAGAAGGAAAATA
CTGAAAGCGAATTTGAAAATTTAAAAAATCACATTCAATCTGGTGATTACACAGAAGAAG
AACTTAATGATGCGGTCGCAAATGTCAAATCGGACAAAGCGTTTGAGAAGTTCCAAAAAC
AAATTGCTGTGGAGCCTGAACAAGTGATCAGATACCAGAGAGAAGGAAGCGTGTTATGGT
GTTCAAGTGAGAATATTCCTAGTAAAATACCTTCGTGTGAATGTGGGGCACAACGGCAGT
TTGAATTTCAGATCATGCCCCAATTACTAAACCACTTGAAAGTTGACCATTCTATTGAAG
GTCCGACCATTGACTGGGGTACAGTGGCCATATATACATGTCATGACGATTGTAATATTT
CACCTTATATAAAGGAATACTGTTGGCTGCAACACTTTTCTAAAGAAGCGATTTAAAAGT
GTTCCAAAATTGATTTTTAATAAAAACTGTTAAAGGGTGTGTATTACACAATGATATGCT
GCAGACGCATTGGTGCAAATATATTTATATATAGTAGAAAGGGGAGGAGATGGGACACCT
CTTCATTCAATTCCATTAGAACCTTCGAAGAATTATAAAACTGTATCCTCAAGACTTCCA
TAGATCGTTGTTAATTGTTTAAAACAAGATATTTGGATATTGTGTGCCAATAAAAGTGTC
TCGTCTTCCCCTAACCCACTATATATAAAGATAAGGTTGAATGAATAAACAGAACTTATT
TATACTCGC

InterProScan

Pfam	Znf_MYND (IPR002893) - T[138-175] 1.2E-7
ProSiteProfiles	Znf_MYND (IPR002893) - T[138-175] 11.179
ProSitePatterns	Znf_MYND (IPR002893) - T[138-175] .
Pfam	PDCD2_C (IPR007320) - T[194-342] 2.5E-39

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PDCD2_HUMAN	42.029 %	253	2.41E-82