- Region 'REG00000473' >
- Transcript 'KH2012:KH.C8.175.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.175.v1.A.ND1-1
Possible name(s)
ATOH1; ATOH7; NEUROD1
Gene model
Location
KhC8 [204,379 / 204,931]
Amino acid sequence
Length: 96
>KH.C8.175.v1.A.ND1-1
SRKRRQAANARERRRMEGLNKAFDSLRKVVPSISRRRKLSKYETLQMALSYIEELGRILQ
TTPSEANEKCSNEADTLHCDRKCNVKIEKKDDEFLR
Nucleotide sequence
Length: 473
>KH2012:KH.C8.175.v1.A.ND1-1
TATCAAGGAAACGAAGACAAGCAGCCAATGCAAGGGAACGGCGAAGAATGGAAGGCTTGA
ATAAAGCGTTCGATTCTCTAAGGAAGGTTGTTCCGTCCATCAGCCGCAGAAGGAAACTTT
CAAAGTATGAAACTTTGCAAATGGCTTTGAGTTATATTGAAGAATTAGGACGAATTTTGC
AGACGACACCATCTGAAGCAAATGAAAAATGTAGCAATGAAGCTGATACCTTACATTGTG
ATCGTAAATGTAATGTTAAAATAGAAAAAAAAGATGATGAGTTTTTACGATGACCCAAAC
CGAAACTGGTTTGGTCCTTAAGTTCCGTCAAGATTTGTAGTGTAGCTTTTGTTCTGAATT
TGCACATTAGTGATGATTTCTCATAAGTAAATTTTACCCCATATTGCACATTTTCTAATT
TTACCACGAGCTTATTGCTGTTGGTTTATATACAGCATCGGATTGTTTGTCTT
| CDD |
bHLH_dom (IPR011598) - T[1-60] 5.03687E-14 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[2-66] 7.07E-20 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[3-55] 16.628 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[3-62] 2.0E-23 |
| Pfam |
bHLH_dom (IPR011598) - T[4-55] 5.2E-18 |
| SMART |
bHLH_dom (IPR011598) - T[9-61] 8.3E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATOH1_HUMAN | 58.904 % | 83.6 | 1.33E-20 |
| ATOH7_HUMAN | 57.353 % | 67.4 | 8.84E-16 |