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TRANSCRIPT CARD

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  1. Region 'REG00000088' > 
  2. Transcript 'KH2012:KH.C8.209.v1....' > 
  3. Transcript 'KH2012:KH.L84.6.v2.R...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S4...' > 
  5. Transcript 'KH2012:KH.C8.209.v3....'

Transcript Model

Transcript Id

KH2012:KH.C8.209.v3.A.ND3-1

Possible name(s)

RPS28

Gene model

KH2012:KH.C8.209

Location

KhC8 [2,359,006 / 2,359,738]

Sequences

Amino acid sequence

Length: 69

>KH.C8.209.v3.A.ND3-1
VNLIGRVLKFTINTDKQFVLFITGLCNAQVRVEFLDDSSRSIVRNVKGPVREGDILTLLE
SEREARRLR

Nucleotide sequence

Length: 505

>KH2012:KH.C8.209.v3.A.ND3-1
CAGTAAACCTAATAGGGCGTGTTTTAAAGTTTACCATTAACACCGATAAACAGTTTGTTC
TTTTTATAACTGGTTTATGTAATGCTCAGGTCCGTGTTGAGTTTCTGGACGACTCCAGCA
GATCAATCGTTCGTAATGTTAAAGGACCAGTAAGAGAGGGAGATATTCTTACCCTGCTTG
AGTCCGAGAGAGAAGCCAGAAGGCTGCGATAAATTAAAAAACTTCCAGTTCCCCAATCTG
TACACGCATACTTGTGTAAAAACTACTGATGTTGCAACCACAATGCCTCAAAACTCCTGT
TAATATCGAATTAGACACCCATTCGAGCTTGAAAATTGTACAATGCTTAATTCTCAATGC
TCTGTTTATACATAGAAAGCATAGTCATGTTTCTGGTGACCTGTACATCAATTCTGTCAA
TGTGTGAATACGTTAGAATAGTTTGTCGTGTGTTGTGTGTATACAGTGCAAGGGAGCTGG
AAATAAAATTCGATATCATGTCCTG

InterProScan

ProDom
Ribosomal_S28e (IPR000289) - T[24-50] 5.0E-5
PANTHER
Ribosomal_S28e (IPR000289) - T[28-69] 1.3E-25
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[28-69] 8.31E-15
Pfam
Ribosomal_S28e (IPR000289) - T[28-68] 1.4E-21
CDD
Ribosomal_S28e (IPR000289) - T[29-69] 3.65002E-22
ProSitePatterns
Ribosomal_S28e_CS (IPR028626) - T[60-68] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS28_HUMAN 84.783 % 79.7 6.09E-22