Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.230.v1.A.ND1-1

Possible name(s)

PBDC1

Gene model

KH2012:KH.C8.230

Location

KhC8 [893,451 / 896,321]

Sequences

Amino acid sequence

Length: 170

>KH.C8.230.v1.A.ND1-1
KMDTNSQSYTNDRTIEVSWAMKAYDEAELHYNLITSVDPTYLQLSKEDDLIYRQFRKSFP
DLDIAHLHEDDLKTAKSKEDWRTFCNKFDGVIQDFNYGTLLRLDPLLEYSESNTLFATRI
QFLAIEIARNKEGFSTRLYQNTRKKKSNISSNGNTIHGIIDATKQISVSS

Nucleotide sequence

Length: 1,020

>KH2012:KH.C8.230.v1.A.ND1-1
TTTGCTATTTCGTTTACGTTCTCATGAAAAATGGATACGAATTCGCAATCATACACAAAT
GACAGAACGATTGAAGTGTCATGGGCAATGAAAGCTTATGATGAGGCAGAACTACATTAT
AACTTGATAACTTCAGTTGATCCAACTTACCTTCAATTATCAAAGGAAGACGATTTAATA
TACCGACAGTTTCGAAAATCATTCCCAGATTTAGACATTGCTCACTTACATGAGGATGAT
TTAAAAACAGCGAAAAGTAAAGAGGATTGGAGAACATTTTGTAATAAGTTCGATGGAGTT
ATTCAAGATTTTAATTATGGAACTTTGTTGCGGTTAGACCCGCTGTTGGAGTATAGTGAA
TCTAATACTTTATTTGCAACTCGAATTCAGTTTTTGGCAATTGAAATTGCTCGAAACAAG
GAAGGATTCAGCACAAGGTTATACCAAAACACTCGCAAAAAAAAATCTAATATTTCTTCA
AATGGAAATACAATCCATGGTATCATAGATGCAACAAAACAAATATCAGTGTCATCGTAA
CCAATATTTCAAACGCTCTCTGTTTTACAGTATTTTACCCATTTTTCTTTTTGTTTCAAT
TGTCAACAGTCAAAAGACTCGCAACTTATACTTAGGATACTATTTTTAAATACATGTAAT
CATTTTCTCAACCTTTCTTCTGACAACACAAATATTTAAGCTATTTTTTTTGTTTTGATT
TTTAGTCACTATTTATATGACAACATTTTTTCACACAACTATTTGTTAGCGTACACTAAA
TTTTCCAGTCTTTTTTTGTGAACTCCCAGCGATCAAATCAAATGGACCAGTTTTGGTCAT
TCCTTTGCGATGCAAAAGTAACTCACAAGCACCTATTTGTGAGTTTTTTTCCAAACAACA
CAATACTATAATAGAAACAAATATGGTAGTTTCTTTTATCTGGTTACGGTAGTTCGTTGA
TTTGGTGGTTGTTTTTTCAAGTAATGTATTTAAAAAAGAAAACCTGGTAAATTCAAGCAC

InterProScan

PANTHER	PBDC1_metazoa/fungi (IPR008476) - T[4-152] 3.3E-64
Gene3D	PBDC1-like_dom_sf (IPR023139) - T[11-142] 5.0E-50
Pfam	Polysacc_synth_dom (IPR021148) - T[15-134] 7.3E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PBDC1_HUMAN	52.381 %	167	6.08E-53