- Transcript 'KH2012:KH.C8.248.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.248.v1.A.nonSL10-1
Possible name(s)
COL19A1; COL21A1; COL24A1
Gene model
Location
KhC8 [5,996,820 / 6,011,828]
Amino acid sequence
Length: 682
>KH.C8.248.v1.A.nonSL10-1
DTFTRTTPRDYSRRVWSAKMFMNKRRVILLVVALLLVTADARKRKRKKNRKSRANDLITR
SRRQGEPDPPADCPVCPAGPAGQPGPPGPPGENGIQGDPGPDGFAGIDGLDGERGPPGPQ
GFQGVSGQKGEPGEIGAPGTEGLIGPAGIPGSLGLPGPAGPQGPPGDVNTVEGPPGRPGA
PGPRGPPGLPGPSGGATAGERVVSNGEVGFVGPPGYPGPKGHKGYKGEPGPDGKQGPKGD
AGPEGEQGPAGPGGESGPRGARGYPGEDGRKGEVGPAGVPGEMGAPGEQGLQGAEGPPGV
PGERGAKGGTGDRGPLGNPGGPGLPGEPGLPGRNGADGIPGTPGERGRPGESGPKGTEGA
IGAPGNSGEQGIQGQPGERGFPGIKGHKGASGMTGAKGEPGNDGNEGPEGNPGPQGTAGT
PGERGSPGTPGENGQRGPGGPPGIIGPEGPRGQSGPRGPQGESGPRGVPGLQGPPGRMPS
DQKILEVCRRVLRDEMRGMMAATRPRGIITGGAPGRPGPVGPPGQQGPQGQSGLPGKTGM
QGAQGVPGMPGRTGPKGFGGDKGDRGAPGIGSVGLPGPAGPPGPQGSPGFGKDGRNGERG
EPGLPGPTGYIGPQGSVGPPGYCDPSTCLMGQVRGIQQPKGPNGQKGPDAADSPLGSEPP
AGTNRRRAARTRHRPEMNDIQF
Nucleotide sequence
Length: 2,570
>KH2012:KH.C8.248.v1.A.nonSL10-1
GACACTTTTACCCGCACCACTCCAAGAGACTACTCACGGCGCGTTTGGAGCGCCAAGATG
TTCATGAACAAGAGGCGAGTGATCCTCTTGGTCGTGGCGCTTCTGCTTGTAACGGCGGAT
GCGAGGAAGCGAAAGAGAAAGAAGAACCGGAAGAGCAGAGCAAATGATCTGATCACTCGG
AGCAGAAGACAAGGAGAGCCGGACCCACCAGCGGATTGCCCGGTTTGTCCAGCGGGACCT
GCAGGACAACCAGGACCCCCAGGACCACCCGGTGAGAACGGAATCCAAGGAGATCCTGGA
CCAGATGGTTTCGCTGGAATTGATGGACTTGATGGTGAAAGAGGACCACCAGGACCCCAG
GGGTTTCAGGGAGTCTCTGGTCAAAAGGGAGAACCAGGAGAAATTGGTGCACCTGGAACA
GAGGGACTCATTGGACCTGCAGGGATACCGGGAAGCCTTGGGTTACCTGGTCCAGCTGGC
CCACAAGGACCTCCAGGTGATGTGAACACCGTTGAGGGACCTCCTGGACGACCAGGTGCT
CCTGGACCAAGGGGACCACCAGGACTTCCCGGACCATCTGGAGGCGCTACGGCTGGTGAA
AGAGTGGTTTCAAATGGTGAAGTTGGTTTTGTTGGACCACCAGGTTATCCCGGACCCAAG
GGTCATAAGGGATACAAAGGTGAACCCGGTCCTGATGGAAAACAAGGTCCAAAGGGTGAT
GCCGGTCCTGAGGGAGAACAAGGACCAGCTGGTCCTGGCGGTGAATCTGGTCCACGTGGG
GCACGAGGTTACCCGGGAGAAGATGGGAGAAAGGGAGAAGTAGGCCCTGCAGGAGTACCT
GGAGAAATGGGTGCACCTGGTGAACAAGGTTTACAGGGAGCTGAAGGTCCTCCTGGAGTC
CCAGGAGAGAGGGGAGCCAAGGGAGGAACTGGGGATCGAGGTCCTCTTGGAAACCCTGGA
GGACCCGGACTTCCTGGAGAACCGGGTCTACCCGGTAGAAATGGAGCTGATGGTATCCCA
GGAACCCCAGGAGAACGGGGACGACCAGGAGAGTCAGGACCAAAAGGAACAGAAGGTGCC
ATAGGAGCTCCTGGTAATTCAGGAGAACAAGGTATTCAGGGTCAACCTGGTGAACGTGGA
TTCCCTGGAATCAAAGGACACAAAGGAGCATCTGGTATGACTGGCGCCAAGGGAGAACCT
GGTAATGATGGAAATGAGGGACCAGAAGGCAACCCTGGACCACAGGGAACTGCTGGAACT
CCAGGAGAACGTGGATCACCAGGAACACCGGGTGAAAATGGGCAACGTGGGCCAGGTGGA
CCACCGGGCATCATTGGACCAGAAGGACCCAGGGGCCAATCTGGGCCACGAGGACCACAA
GGAGAATCTGGACCAAGAGGCGTCCCTGGATTACAAGGCCCTCCTGGGCGCATGCCAAGT
GACCAAAAGATTCTGGAAGTTTGCCGTAGGGTGCTTCGAGATGAGATGAGAGGTATGATG
GCAGCAACCAGACCCCGAGGTATCATCACTGGTGGAGCTCCTGGAAGACCTGGACCTGTT
GGACCACCTGGACAGCAAGGACCACAAGGACAATCTGGTCTTCCTGGTAAAACTGGAATG
CAAGGTGCACAGGGTGTTCCTGGAATGCCTGGACGTACTGGACCCAAAGGATTTGGTGGT
GATAAAGGTGACAGAGGAGCGCCAGGAATTGGCAGCGTTGGTCTTCCAGGACCTGCTGGT
CCTCCAGGACCCCAAGGATCACCAGGGTTTGGTAAAGATGGTCGTAACGGAGAACGTGGT
GAACCCGGCTTACCTGGACCCACAGGTTACATTGGGCCACAGGGTTCTGTTGGTCCTCCT
GGTTACTGCGACCCATCTACTTGCTTGATGGGTCAAGTCCGTGGCATTCAACAACCTAAA
GGTCCAAATGGCCAGAAAGGTCCTGATGCAGCGGACAGCCCATTGGGCTCAGAACCACCT
GCGGGCACAAACCGTCGCCGTGCTGCACGTACCCGCCACCGACCCGAGATGAATGATATT
CAGTTTTAACTGAAACTAAAAACTACTTTGATTACCGCGCGATCGCACCGTGTGGAGATA
TGACTCAAAATTTGTAATGTAACCAATTTTATCTGCGTGCGTTATATTTTTCCATCACCG
TGCTACAGTATATTGTTGCATCATATTAGCCGTCGTCATGTTGTCGTCACTGCTTGTTGT
CAGTTTGTTTTCCGAAGCGATTTTACATTTTATTACATTTTCACGCCTAAAAAGTGTCAT
GATTTACTGAGATGGCTGCGTTTGTACAAGAGATTGGAACTTTTTCATATAGTAGGATTT
TGAAAGACACCTTTGGCGTACAATATCCAAATATCCGGATCGTGTTTCAAATAACTAACA
ACGCTTTATGGGTGTTGTAAGGATACGAATTTGCAATTTTTGTTTACTACTAAACGGATG
AGAAAATACAATGAAAAAGTGTCCCATTTCCCCCCACCCTACTATACAACATTTCACTAA
AACTAAAATATCTATGTTGTCCAGTGTGGTTTGGACATTAGTTATTACAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COOA1_HUMAN | 40.625 % | 185 | 7.37E-49 |
| CO9A1_HUMAN | 40.32 % | 178 | 6.34E-47 |
| CO4A6_HUMAN | 37.778 % | 171 | 2.04E-44 |