- Transcript 'KH2012:KH.C8.248.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.248.v1.A.nonSL13-1
Possible name(s)
COL19A1; COL21A1; COL24A1
Gene model
Location
KhC8 [5,996,820 / 6,011,852]
Amino acid sequence
Length: 690
>KH.C8.248.v1.A.nonSL13-1
VSSAGVGTDTFTRTTPRDYSRRVWSAKMFMNKRRVILLVVALLLVTADARKRKRKKNRKS
RANDLITRSRRQGEPDPPADCPVCPAGPAGQPGPPGPPGENGIQGDPGPDGFAGIDGLDG
ERGPPGPQGFQGVSGQKGEPGEIGAPGTEGLIGPAGIPGSLGLPGPAGPQGPPGDVNTVE
GPPGRPGAPGPRGPPGLPGPSGGATAGERVVSNGEVGFVGPPGYPGPKGHKGYKGEPGPD
GKQGPKGDAGPEGEQGPAGPGGESGPRGARGYPGEDGRKGEVGPAGVPGEMGAPGEQGLQ
GAEGPPGVPGERGAKGGTGDRGPLGNPGGPGLPGEPGLPGRNGADGIPGTPGERGRPGES
GPKGTEGAIGAPGNSGEQGIQGQPGERGFPGIKGHKGASGMTGAKGEPGNDGNEGPEGNP
GPQGTAGTPGERGSPGTPGENGQRGPGGPPGIIGPEGPRGQSGPRGPQGESGPRGVPGLQ
GPPGRMPSDQKILEVCRRVLRDEMRGMMAATRPRGIITGGAPGRPGPVGPPGQQGPQGQS
GLPGKTGMQGAQGVPGMPGRTGPKGFGGDKGDRGAPGIGSVGLPGPAGPPGPQGSPGFGK
DGRNGERGEPGLPGPTGYIGPQGSVGPPGYCDPSTCLMGQVRGIQQPKGPNGQKGPDAAD
SPLGSEPPAGTNRRRAARTRHRPEMNDIQF
Nucleotide sequence
Length: 2,594
>KH2012:KH.C8.248.v1.A.nonSL13-1
GTTAGTAGTGCGGGCGTCGGCACCGACACTTTTACCCGCACCACTCCAAGAGACTACTCA
CGGCGCGTTTGGAGCGCCAAGATGTTCATGAACAAGAGGCGAGTGATCCTCTTGGTCGTG
GCGCTTCTGCTTGTAACGGCGGATGCGAGGAAGCGAAAGAGAAAGAAGAACCGGAAGAGC
AGAGCAAATGATCTGATCACTCGGAGCAGAAGACAAGGAGAGCCGGACCCACCAGCGGAT
TGCCCGGTTTGTCCAGCGGGACCTGCAGGACAACCAGGACCCCCAGGACCACCCGGTGAG
AACGGAATCCAAGGAGATCCTGGACCAGATGGTTTCGCTGGAATTGATGGACTTGATGGT
GAAAGAGGACCACCAGGACCCCAGGGGTTTCAGGGAGTCTCTGGTCAAAAGGGAGAACCA
GGAGAAATTGGTGCACCTGGAACAGAGGGACTCATTGGACCTGCAGGGATACCGGGAAGC
CTTGGGTTACCTGGTCCAGCTGGCCCACAAGGACCTCCAGGTGATGTGAACACCGTTGAG
GGACCTCCTGGACGACCAGGTGCTCCTGGACCAAGGGGACCACCAGGACTTCCCGGACCA
TCTGGAGGCGCTACGGCTGGTGAAAGAGTGGTTTCAAATGGTGAAGTTGGTTTTGTTGGA
CCACCAGGTTATCCCGGACCCAAGGGTCATAAGGGATACAAAGGTGAACCCGGTCCTGAT
GGAAAACAAGGTCCAAAGGGTGATGCCGGTCCTGAGGGAGAACAAGGACCAGCTGGTCCT
GGCGGTGAATCTGGTCCACGTGGGGCACGAGGTTACCCGGGAGAAGATGGGAGAAAGGGA
GAAGTAGGCCCTGCAGGAGTACCTGGAGAAATGGGTGCACCTGGTGAACAAGGTTTACAG
GGAGCTGAAGGTCCTCCTGGAGTCCCAGGAGAGAGGGGAGCCAAGGGAGGAACTGGGGAT
CGAGGTCCTCTTGGAAACCCTGGAGGACCCGGACTTCCTGGAGAACCGGGTCTACCCGGT
AGAAATGGAGCTGATGGTATCCCAGGAACCCCAGGAGAACGGGGACGACCAGGAGAGTCA
GGACCAAAAGGAACAGAAGGTGCCATAGGAGCTCCTGGTAATTCAGGAGAACAAGGTATT
CAGGGTCAACCTGGTGAACGTGGATTCCCTGGAATCAAAGGACACAAAGGAGCATCTGGT
ATGACTGGCGCCAAGGGAGAACCTGGTAATGATGGAAATGAGGGACCAGAAGGCAACCCT
GGACCACAGGGAACTGCTGGAACTCCAGGAGAACGTGGATCACCAGGAACACCGGGTGAA
AATGGGCAACGTGGGCCAGGTGGACCACCGGGCATCATTGGACCAGAAGGACCCAGGGGC
CAATCTGGGCCACGAGGACCACAAGGAGAATCTGGACCAAGAGGCGTCCCTGGATTACAA
GGCCCTCCTGGGCGCATGCCAAGTGACCAAAAGATTCTGGAAGTTTGCCGTAGGGTGCTT
CGAGATGAGATGAGAGGTATGATGGCAGCAACCAGACCCCGAGGTATCATCACTGGTGGA
GCTCCTGGAAGACCTGGACCTGTTGGACCACCTGGACAGCAAGGACCACAAGGACAATCT
GGTCTTCCTGGTAAAACTGGAATGCAAGGTGCACAGGGTGTTCCTGGAATGCCTGGACGT
ACTGGACCCAAAGGATTTGGTGGTGATAAAGGTGACAGAGGAGCGCCAGGAATTGGCAGC
GTTGGTCTTCCAGGACCTGCTGGTCCTCCAGGACCCCAAGGATCACCAGGGTTTGGTAAA
GATGGTCGTAACGGAGAACGTGGTGAACCCGGCTTACCTGGACCCACAGGTTACATTGGG
CCACAGGGTTCTGTTGGTCCTCCTGGTTACTGCGACCCATCTACTTGCTTGATGGGTCAA
GTCCGTGGCATTCAACAACCTAAAGGTCCAAATGGCCAGAAAGGTCCTGATGCAGCGGAC
AGCCCATTGGGCTCAGAACCACCTGCGGGCACAAACCGTCGCCGTGCTGCACGTACCCGC
CACCGACCCGAGATGAATGATATTCAGTTTTAACTGAAACTAAAAACTACTTTGATTACC
GCGCGATCGCACCGTGTGGAGATATGACTCAAAATTTGTAATGTAACCAATTTTATCTGC
GTGCGTTATATTTTTCCATCACCGTGCTACAGTATATTGTTGCATCATATTAGCCGTCGT
CATGTTGTCGTCACTGCTTGTTGTCAGTTTGTTTTCCGAAGCGATTTTACATTTTATTAC
ATTTTCACGCCTAAAAAGTGTCATGATTTACTGAGATGGCTGCGTTTGTACAAGAGATTG
GAACTTTTTCATATAGTAGGATTTTGAAAGACACCTTTGGCGTACAATATCCAAATATCC
GGATCGTGTTTCAAATAACTAACAACGCTTTATGGGTGTTGTAAGGATACGAATTTGCAA
TTTTTGTTTACTACTAAACGGATGAGAAAATACAATGAAAAAGTGTCCCATTTCCCCCCA
CCCTACTATACAACATTTCACTAAAACTAAAATATCTATGTTGTCCAGTGTGGTTTGGAC
ATTAGTTATTACAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COLA1_HUMAN | 44.037 % | 171 | 1.32E-44 |
| COOA1_HUMAN | 40.625 % | 186 | 5.02E-49 |
| CO9A1_HUMAN | 40.32 % | 178 | 8.84E-47 |