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- Transcript 'KH2012:KH.C8.248.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.248.v1.A.nonSL5-1
Possible name(s)
COL19A1; COL21A1; COL24A1
Gene model
Location
KhC8 [5,996,820 / 6,011,831]
Amino acid sequence
Length: 683
>KH.C8.248.v1.A.nonSL5-1
TDTFTRTTPRDYSRRVWSAKMFMNKRRVILLVVALLLVTADARKRKRKKNRKSRANDLIT
RSRRQGEPDPPADCPVCPAGPAGQPGPPGPPGENGIQGDPGPDGFAGIDGLDGERGPPGP
QGFQGVSGQKGEPGEIGAPGTEGLIGPAGIPGSLGLPGPAGPQGPPGDVNTVEGPPGRPG
APGPRGPPGLPGPSGGATAGERVVSNGEVGFVGPPGYPGPKGHKGYKGEPGPDGKQGPKG
DAGPEGEQGPAGPGGESGPRGARGYPGEDGRKGEVGPAGVPGEMGAPGEQGLQGAEGPPG
VPGERGAKGGTGDRGPLGNPGGPGLPGEPGLPGRNGADGIPGTPGERGRPGESGPKGTEG
AIGAPGNSGEQGIQGQPGERGFPGIKGHKGASGMTGAKGEPGNDGNEGPEGNPGPQGTAG
TPGERGSPGTPGENGQRGPGGPPGIIGPEGPRGQSGPRGPQGESGPRGVPGLQGPPGRMP
SDQKILEVCRRVLRDEMRGMMAATRPRGIITGGAPGRPGPVGPPGQQGPQGQSGLPGKTG
MQGAQGVPGMPGRTGPKGFGGDKGDRGAPGIGSVGLPGPAGPPGPQGSPGFGKDGRNGER
GEPGLPGPTGYIGPQGSVGPPGYCDPSTCLMGQVRGIQQPKGPNGQKGPDAADSPLGSEP
PAGTNRRRAARTRHRPEMNDIQF
Nucleotide sequence
Length: 2,573
>KH2012:KH.C8.248.v1.A.nonSL5-1
ACCGACACTTTTACCCGCACCACTCCAAGAGACTACTCACGGCGCGTTTGGAGCGCCAAG
ATGTTCATGAACAAGAGGCGAGTGATCCTCTTGGTCGTGGCGCTTCTGCTTGTAACGGCG
GATGCGAGGAAGCGAAAGAGAAAGAAGAACCGGAAGAGCAGAGCAAATGATCTGATCACT
CGGAGCAGAAGACAAGGAGAGCCGGACCCACCAGCGGATTGCCCGGTTTGTCCAGCGGGA
CCTGCAGGACAACCAGGACCCCCAGGACCACCCGGTGAGAACGGAATCCAAGGAGATCCT
GGACCAGATGGTTTCGCTGGAATTGATGGACTTGATGGTGAAAGAGGACCACCAGGACCC
CAGGGGTTTCAGGGAGTCTCTGGTCAAAAGGGAGAACCAGGAGAAATTGGTGCACCTGGA
ACAGAGGGACTCATTGGACCTGCAGGGATACCGGGAAGCCTTGGGTTACCTGGTCCAGCT
GGCCCACAAGGACCTCCAGGTGATGTGAACACCGTTGAGGGACCTCCTGGACGACCAGGT
GCTCCTGGACCAAGGGGACCACCAGGACTTCCCGGACCATCTGGAGGCGCTACGGCTGGT
GAAAGAGTGGTTTCAAATGGTGAAGTTGGTTTTGTTGGACCACCAGGTTATCCCGGACCC
AAGGGTCATAAGGGATACAAAGGTGAACCCGGTCCTGATGGAAAACAAGGTCCAAAGGGT
GATGCCGGTCCTGAGGGAGAACAAGGACCAGCTGGTCCTGGCGGTGAATCTGGTCCACGT
GGGGCACGAGGTTACCCGGGAGAAGATGGGAGAAAGGGAGAAGTAGGCCCTGCAGGAGTA
CCTGGAGAAATGGGTGCACCTGGTGAACAAGGTTTACAGGGAGCTGAAGGTCCTCCTGGA
GTCCCAGGAGAGAGGGGAGCCAAGGGAGGAACTGGGGATCGAGGTCCTCTTGGAAACCCT
GGAGGACCCGGACTTCCTGGAGAACCGGGTCTACCCGGTAGAAATGGAGCTGATGGTATC
CCAGGAACCCCAGGAGAACGGGGACGACCAGGAGAGTCAGGACCAAAAGGAACAGAAGGT
GCCATAGGAGCTCCTGGTAATTCAGGAGAACAAGGTATTCAGGGTCAACCTGGTGAACGT
GGATTCCCTGGAATCAAAGGACACAAAGGAGCATCTGGTATGACTGGCGCCAAGGGAGAA
CCTGGTAATGATGGAAATGAGGGACCAGAAGGCAACCCTGGACCACAGGGAACTGCTGGA
ACTCCAGGAGAACGTGGATCACCAGGAACACCGGGTGAAAATGGGCAACGTGGGCCAGGT
GGACCACCGGGCATCATTGGACCAGAAGGACCCAGGGGCCAATCTGGGCCACGAGGACCA
CAAGGAGAATCTGGACCAAGAGGCGTCCCTGGATTACAAGGCCCTCCTGGGCGCATGCCA
AGTGACCAAAAGATTCTGGAAGTTTGCCGTAGGGTGCTTCGAGATGAGATGAGAGGTATG
ATGGCAGCAACCAGACCCCGAGGTATCATCACTGGTGGAGCTCCTGGAAGACCTGGACCT
GTTGGACCACCTGGACAGCAAGGACCACAAGGACAATCTGGTCTTCCTGGTAAAACTGGA
ATGCAAGGTGCACAGGGTGTTCCTGGAATGCCTGGACGTACTGGACCCAAAGGATTTGGT
GGTGATAAAGGTGACAGAGGAGCGCCAGGAATTGGCAGCGTTGGTCTTCCAGGACCTGCT
GGTCCTCCAGGACCCCAAGGATCACCAGGGTTTGGTAAAGATGGTCGTAACGGAGAACGT
GGTGAACCCGGCTTACCTGGACCCACAGGTTACATTGGGCCACAGGGTTCTGTTGGTCCT
CCTGGTTACTGCGACCCATCTACTTGCTTGATGGGTCAAGTCCGTGGCATTCAACAACCT
AAAGGTCCAAATGGCCAGAAAGGTCCTGATGCAGCGGACAGCCCATTGGGCTCAGAACCA
CCTGCGGGCACAAACCGTCGCCGTGCTGCACGTACCCGCCACCGACCCGAGATGAATGAT
ATTCAGTTTTAACTGAAACTAAAAACTACTTTGATTACCGCGCGATCGCACCGTGTGGAG
ATATGACTCAAAATTTGTAATGTAACCAATTTTATCTGCGTGCGTTATATTTTTCCATCA
CCGTGCTACAGTATATTGTTGCATCATATTAGCCGTCGTCATGTTGTCGTCACTGCTTGT
TGTCAGTTTGTTTTCCGAAGCGATTTTACATTTTATTACATTTTCACGCCTAAAAAGTGT
CATGATTTACTGAGATGGCTGCGTTTGTACAAGAGATTGGAACTTTTTCATATAGTAGGA
TTTTGAAAGACACCTTTGGCGTACAATATCCAAATATCCGGATCGTGTTTCAAATAACTA
ACAACGCTTTATGGGTGTTGTAAGGATACGAATTTGCAATTTTTGTTTACTACTAAACGG
ATGAGAAAATACAATGAAAAAGTGTCCCATTTCCCCCCACCCTACTATACAACATTTCAC
TAAAACTAAAATATCTATGTTGTCCAGTGTGGTTTGGACATTAGTTATTACAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COOA1_HUMAN | 40.625 % | 185 | 7.35E-49 |
| CO9A1_HUMAN | 40.32 % | 178 | 6.37E-47 |
| CO4A6_HUMAN | 37.778 % | 171 | 2.32E-44 |