- Transcript 'KH2012:KH.C1.250.v1....' >
- Transcript 'Cisavi.CG.ENS81.R122...' >
- Region 'REG00000408' >
- Transcript 'KH2012:KH.C8.248.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.248.v1.R.ND3-1
Possible name(s)
COL19A1; COL21A1; COL24A1
Gene model
Location
KhC8 [5,996,820 / 6,011,834]
Amino acid sequence
Length: 684
>KH.C8.248.v1.R.ND3-1
GTDTFTRTTPRDYSRRVWSAKMFMNKRRVILLVVALLLVTADARKRKRKKNRKSRANDLI
TRSRRQGEPDPPADCPVCPAGPAGQPGPPGPPGENGIQGDPGPDGFAGIDGLDGERGPPG
PQGFQGVSGQKGEPGEIGAPGTEGLIGPAGIPGSLGLPGPAGPQGPPGDVNTVEGPPGRP
GAPGPRGPPGLPGPSGGATAGERVVSNGEVGFVGPPGYPGPKGHKGYKGEPGPDGKQGPK
GDAGPEGEQGPAGPGGESGPRGARGYPGEDGRKGEVGPAGVPGEMGAPGEQGLQGAEGPP
GVPGERGAKGGTGDRGPLGNPGGPGLPGEPGLPGRNGADGIPGTPGERGRPGESGPKGTE
GAIGAPGNSGEQGIQGQPGERGFPGIKGHKGASGMTGAKGEPGNDGNEGPEGNPGPQGTA
GTPGERGSPGTPGENGQRGPGGPPGIIGPEGPRGQSGPRGPQGESGPRGVPGLQGPPGRM
PSDQKILEVCRRVLRDEMRGMMAATRPRGIITGGAPGRPGPVGPPGQQGPQGQSGLPGKT
GMQGAQGVPGMPGRTGPKGFGGDKGDRGAPGIGSVGLPGPAGPPGPQGSPGFGKDGRNGE
RGEPGLPGPTGYIGPQGSVGPPGYCDPSTCLMGQVRGIQQPKGPNGQKGPDAADSPLGSE
PPAGTNRRRAARTRHRPEMNDIQF
Nucleotide sequence
Length: 2,576
>KH2012:KH.C8.248.v1.R.ND3-1
GGCACCGACACTTTTACCCGCACCACTCCAAGAGACTACTCACGGCGCGTTTGGAGCGCC
AAGATGTTCATGAACAAGAGGCGAGTGATCCTCTTGGTCGTGGCGCTTCTGCTTGTAACG
GCGGATGCGAGGAAGCGAAAGAGAAAGAAGAACCGGAAGAGCAGAGCAAATGATCTGATC
ACTCGGAGCAGAAGACAAGGAGAGCCGGACCCACCAGCGGATTGCCCGGTTTGTCCAGCG
GGACCTGCAGGACAACCAGGACCCCCAGGACCACCCGGTGAGAACGGAATCCAAGGAGAT
CCTGGACCAGATGGTTTCGCTGGAATTGATGGACTTGATGGTGAAAGAGGACCACCAGGA
CCCCAGGGGTTTCAGGGAGTCTCTGGTCAAAAGGGAGAACCAGGAGAAATTGGTGCACCT
GGAACAGAGGGACTCATTGGACCTGCAGGGATACCGGGAAGCCTTGGGTTACCTGGTCCA
GCTGGCCCACAAGGACCTCCAGGTGATGTGAACACCGTTGAGGGACCTCCTGGACGACCA
GGTGCTCCTGGACCAAGGGGACCACCAGGACTTCCCGGACCATCTGGAGGCGCTACGGCT
GGTGAAAGAGTGGTTTCAAATGGTGAAGTTGGTTTTGTTGGACCACCAGGTTATCCCGGA
CCCAAGGGTCATAAGGGATACAAAGGTGAACCCGGTCCTGATGGAAAACAAGGTCCAAAG
GGTGATGCCGGTCCTGAGGGAGAACAAGGACCAGCTGGTCCTGGCGGTGAATCTGGTCCA
CGTGGGGCACGAGGTTACCCGGGAGAAGATGGGAGAAAGGGAGAAGTAGGCCCTGCAGGA
GTACCTGGAGAAATGGGTGCACCTGGTGAACAAGGTTTACAGGGAGCTGAAGGTCCTCCT
GGAGTCCCAGGAGAGAGGGGAGCCAAGGGAGGAACTGGGGATCGAGGTCCTCTTGGAAAC
CCTGGAGGACCCGGACTTCCTGGAGAACCGGGTCTACCCGGTAGAAATGGAGCTGATGGT
ATCCCAGGAACCCCAGGAGAACGGGGACGACCAGGAGAGTCAGGACCAAAAGGAACAGAA
GGTGCCATAGGAGCTCCTGGTAATTCAGGAGAACAAGGTATTCAGGGTCAACCTGGTGAA
CGTGGATTCCCTGGAATCAAAGGACACAAAGGAGCATCTGGTATGACTGGCGCCAAGGGA
GAACCTGGTAATGATGGAAATGAGGGACCAGAAGGCAACCCTGGACCACAGGGAACTGCT
GGAACTCCAGGAGAACGTGGATCACCAGGAACACCGGGTGAAAATGGGCAACGTGGGCCA
GGTGGACCACCGGGCATCATTGGACCAGAAGGACCCAGGGGCCAATCTGGGCCACGAGGA
CCACAAGGAGAATCTGGACCAAGAGGCGTCCCTGGATTACAAGGCCCTCCTGGGCGCATG
CCAAGTGACCAAAAGATTCTGGAAGTTTGCCGTAGGGTGCTTCGAGATGAGATGAGAGGT
ATGATGGCAGCAACCAGACCCCGAGGTATCATCACTGGTGGAGCTCCTGGAAGACCTGGA
CCTGTTGGACCACCTGGACAGCAAGGACCACAAGGACAATCTGGTCTTCCTGGTAAAACT
GGAATGCAAGGTGCACAGGGTGTTCCTGGAATGCCTGGACGTACTGGACCCAAAGGATTT
GGTGGTGATAAAGGTGACAGAGGAGCGCCAGGAATTGGCAGCGTTGGTCTTCCAGGACCT
GCTGGTCCTCCAGGACCCCAAGGATCACCAGGGTTTGGTAAAGATGGTCGTAACGGAGAA
CGTGGTGAACCCGGCTTACCTGGACCCACAGGTTACATTGGGCCACAGGGTTCTGTTGGT
CCTCCTGGTTACTGCGACCCATCTACTTGCTTGATGGGTCAAGTCCGTGGCATTCAACAA
CCTAAAGGTCCAAATGGCCAGAAAGGTCCTGATGCAGCGGACAGCCCATTGGGCTCAGAA
CCACCTGCGGGCACAAACCGTCGCCGTGCTGCACGTACCCGCCACCGACCCGAGATGAAT
GATATTCAGTTTTAACTGAAACTAAAAACTACTTTGATTACCGCGCGATCGCACCGTGTG
GAGATATGACTCAAAATTTGTAATGTAACCAATTTTATCTGCGTGCGTTATATTTTTCCA
TCACCGTGCTACAGTATATTGTTGCATCATATTAGCCGTCGTCATGTTGTCGTCACTGCT
TGTTGTCAGTTTGTTTTCCGAAGCGATTTTACATTTTATTACATTTTCACGCCTAAAAAG
TGTCATGATTTACTGAGATGGCTGCGTTTGTACAAGAGATTGGAACTTTTTCATATAGTA
GGATTTTGAAAGACACCTTTGGCGTACAATATCCAAATATCCGGATCGTGTTTCAAATAA
CTAACAACGCTTTATGGGTGTTGTAAGGATACGAATTTGCAATTTTTGTTTACTACTAAA
CGGATGAGAAAATACAATGAAAAAGTGTCCCATTTCCCCCCACCCTACTATACAACATTT
CACTAAAACTAAAATATCTATGTTGTCCAGTGTGGTTTGGACATTAGTTATTACAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COLA1_HUMAN | 44.037 % | 171 | 1.46E-44 |
| COOA1_HUMAN | 40.625 % | 186 | 4.81E-49 |
| CO9A1_HUMAN | 40.32 % | 177 | 1.83E-46 |