- Region 'REG00001500' >
- Transcript 'KH2012:KH.C2.92.v1.A...' >
- Transcript 'KH2012:KH.C8.248.v6....'
Transcript Model
Transcript Id
KH2012:KH.C8.248.v6.A.ND1-1
Possible name(s)
COL19A1; COL21A1; COL24A1
Gene model
Location
KhC8 [5,996,820 / 6,014,996]
Amino acid sequence
Length: 771
>KH.C8.248.v6.A.ND1-1
RNVYPMGLPSEYSFVSTFRMLGKNTRKQWKLWLVNDGDGSEQIGVNLDGANRLVELISRG
NDGYVHKATFVNTDALFDDKWHKLVMSVEEDQVSLYIDCNLVDTLPFTDRAPADVDGDTL
VGRIGKNNAKSAAIELQWMIIHCDPTRAHRESCDELPALCPVCPAGPAGQPGPPGPPGEN
GIQGDPGPDGFAGIDGLDGERGPPGPQGFQGVSGQKGEPGEIGAPGTEGLIGPAGIPGSL
GLPGPAGPQGPPGDVNTVEGPPGRPGAPGPRGPPGLPGPSGGATAGDIGSGADPSGPVYV
GPPGYPGPKGHKGYKGEPGPDGKQGPKGDAGPEGEQGPAGPGGESGPRGARGYPGEDGRK
GEVGPAGVPGEMGAPGEQGLQGAEGPPGVPGERGAKGGTGDRGPLGNPGGPGLPGEPGLP
GRNGADGIPGTPGERGRPGESGPKGTEGAIGAPGNSGEQGIQGQPGERGFPGIKGHKGAS
GMTGAKGEPGNDGNEGPEGNPGPQGTAGTPGERGSPGTPGENGQRGPGGPPGIIGPEGPR
GQSGPRGPQGESGPRGVPGLQGPPGRMPSDQKILEVCRRVLRDEMRGMMAATRPRGIITG
GAPGRPGPVGPPGQQGPQGQSGLPGKTGMQGAQGVPGMPGRTGPKGFGGDKGDRGAPGIG
SVGLPGPAGPPGPQGSPGFGKDGRNGERGEPGLPGPTGYIGPQGSVGPPGYCDPSTCLMG
QVRGIQQPKGPNGQKGPDAADSPLGSEPPAGTNRRRAARTRHRPEMNDIQF
Nucleotide sequence
Length: 2,837
>KH2012:KH.C8.248.v6.A.ND1-1
AGGAATGTGTACCCAATGGGACTTCCAAGCGAATATTCTTTCGTAAGCACCTTTAGAATG
CTGGGAAAGAACACAAGAAAGCAATGGAAGCTTTGGCTGGTCAACGATGGAGATGGTTCA
GAACAGATTGGAGTCAATTTGGACGGAGCCAACCGATTGGTTGAGCTAATATCACGTGGC
AATGACGGTTACGTACACAAAGCCACGTTCGTGAACACGGACGCTTTATTTGATGATAAA
TGGCACAAACTCGTCATGTCCGTCGAGGAAGACCAAGTCTCATTGTACATTGATTGTAAC
TTGGTTGACACGCTACCCTTCACTGATCGCGCACCTGCCGATGTAGATGGTGACACGTTG
GTGGGGAGGATCGGGAAAAACAACGCAAAGTCTGCGGCAATTGAACTACAGTGGATGATA
ATACATTGCGACCCGACAAGAGCGCATAGGGAATCATGCGACGAACTACCTGCCTTGTGC
CCGGTTTGTCCAGCGGGACCTGCAGGACAACCAGGACCCCCAGGACCACCCGGTGAGAAC
GGAATCCAAGGAGATCCTGGACCAGATGGTTTCGCTGGAATTGATGGACTTGATGGTGAA
AGAGGACCACCAGGACCCCAGGGGTTTCAGGGAGTCTCTGGTCAAAAGGGAGAACCAGGA
GAAATTGGTGCACCTGGAACAGAGGGACTCATTGGACCTGCAGGGATACCGGGAAGCCTT
GGGTTACCTGGTCCAGCTGGCCCACAAGGACCTCCAGGTGATGTGAACACCGTTGAGGGA
CCTCCTGGACGACCAGGTGCTCCTGGACCAAGGGGACCACCAGGACTTCCCGGACCATCT
GGAGGCGCTACGGCTGGTGATATTGGTTCAGGGGCTGATCCATCTGGCCCAGTCTATGTT
GGACCACCAGGTTATCCCGGACCCAAGGGTCATAAGGGATACAAAGGTGAACCCGGTCCT
GATGGAAAACAAGGTCCAAAGGGTGATGCCGGTCCTGAGGGAGAACAAGGACCAGCTGGT
CCTGGCGGTGAATCTGGTCCACGTGGGGCACGAGGTTACCCGGGAGAAGATGGGAGAAAG
GGAGAAGTAGGCCCTGCAGGAGTACCTGGAGAAATGGGTGCACCTGGTGAACAAGGTTTA
CAGGGAGCTGAAGGTCCTCCTGGAGTCCCAGGAGAGAGGGGAGCCAAGGGAGGAACTGGG
GATCGAGGTCCTCTTGGAAACCCTGGAGGACCCGGACTTCCTGGAGAACCGGGTCTACCC
GGTAGAAATGGAGCTGATGGTATCCCAGGAACCCCAGGAGAACGGGGACGACCAGGAGAG
TCAGGACCAAAAGGAACAGAAGGTGCCATAGGAGCTCCTGGTAATTCAGGAGAACAAGGT
ATTCAGGGTCAACCTGGTGAACGTGGATTCCCTGGAATCAAAGGACACAAAGGAGCATCT
GGTATGACTGGCGCCAAGGGAGAACCTGGTAATGATGGAAATGAGGGACCAGAAGGCAAC
CCTGGACCACAGGGAACTGCTGGAACTCCAGGAGAACGTGGATCACCAGGAACACCGGGT
GAAAATGGGCAACGTGGGCCAGGTGGACCACCGGGCATCATTGGACCAGAAGGACCCAGG
GGCCAATCTGGGCCACGAGGACCACAAGGAGAATCTGGACCAAGAGGCGTCCCTGGATTA
CAAGGCCCTCCTGGGCGCATGCCAAGTGACCAAAAGATTCTGGAAGTTTGCCGTAGGGTG
CTTCGAGATGAGATGAGAGGTATGATGGCAGCAACCAGACCCCGAGGTATCATCACTGGT
GGAGCTCCTGGAAGACCTGGACCTGTTGGACCACCTGGACAGCAAGGACCACAAGGACAA
TCTGGTCTTCCTGGTAAAACTGGAATGCAAGGTGCACAGGGTGTTCCTGGAATGCCTGGA
CGTACTGGACCCAAAGGATTTGGTGGTGATAAAGGTGACAGAGGAGCGCCAGGAATTGGC
AGCGTTGGTCTTCCAGGACCTGCTGGTCCTCCAGGACCCCAAGGATCACCAGGGTTTGGT
AAAGATGGTCGTAACGGAGAACGTGGTGAACCCGGCTTACCTGGACCCACAGGTTACATT
GGGCCACAGGGTTCTGTTGGTCCTCCTGGTTACTGCGACCCATCTACTTGCTTGATGGGT
CAAGTCCGTGGCATTCAACAACCTAAAGGTCCAAATGGCCAGAAAGGTCCTGATGCAGCG
GACAGCCCATTGGGCTCAGAACCACCTGCGGGCACAAACCGTCGCCGTGCTGCACGTACC
CGCCACCGACCCGAGATGAATGATATTCAGTTTTAACTGAAACTAAAAACTACTTTGATT
ACCGCGCGATCGCACCGTGTGGAGATATGACTCAAAATTTGTAATGTAACCAATTTTATC
TGCGTGCGTTATATTTTTCCATCACCGTGCTACAGTATATTGTTGCATCATATTAGCCGT
CGTCATGTTGTCGTCACTGCTTGTTGTCAGTTTGTTTTCCGAAGCGATTTTACATTTTAT
TACATTTTCACGCCTAAAAAGTGTCATGATTTACTGAGATGGCTGCGTTTGTACAAGAGA
TTGGAACTTTTTCATATAGTAGGATTTTGAAAGACACCTTTGGCGTACAATATCCAAATA
TCCGGATCGTGTTTCAAATAACTAACAACGCTTTATGGGTGTTGTAAGGATACGAATTTG
CAATTTTTGTTTACTACTAAACGGATGAGAAAATACAATGAAAAAGTGTCCCATTTCCCC
CCACCCTACTATACAACATTTCACTAAAACTAAAATATCTATGTTGTCCAGTGTGGTTTG
GACATTAGTTATTACAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COLA1_HUMAN | 39.867 % | 275 | 4.91E-80 |
| COOA1_HUMAN | 37.649 % | 191 | 3.75E-50 |
| COJA1_HUMAN | 33.553 % | 201 | 5.83E-54 |