- Transcript 'KH2012:KH.L18.5.v1.A...' >
- Clone 'ciem811k06' >
- Clone 'AHC0AAA201YH17' >
- Transcript 'KH2012:KH.C8.273.v2....'
Transcript Model
Transcript Id
KH2012:KH.C8.273.v2.A.SL1-1
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
KhC8 [4,706,158 / 4,715,293]
Amino acid sequence
Length: 420
>KH.C8.273.v2.A.SL1-1
FQIMWSPTDVVVTVRQARNLLVKGKSGSNEAYATIEFCKDKYLTSTDKSTTPRWFTQCSF
TLPQGGVFHNKIVVHVTVMNKRHGKLGLESDDFLGQVSVPLSALNSCDNKERARWYELNG
KKSGNKKERGEVEISFKFISQEKSQVLPVKKEKPMKIISTGFRSKLRRRSEDEDSGVGIS
DGDRTSSMGRGRSYENLSMPSITDQPMPTPFERTFRTSSTNSSPGSLVSARGSAKLKNSN
LSSKAMSVEVLHRPPTNQTTSLYRSNSGTGDSGHGSNASSPEVKPRSTSMTDIHKADCPT
HNTLNKNDSNSVKRNVTHDSSQSRMKPIAPITALYKPKNYYRLDVKELGKVSTIHEEPDT
TLQTMSHKDLVKLASKQKMIIADKNQTIRELEDYIDSLLVKVMVCTPDILDVQSSHITKL
Nucleotide sequence
Length: 1,939
>KH2012:KH.C8.273.v2.A.SL1-1
TAGCCATTAATTTGTACTATCATTGTTCAGTATATATACAGATATTTGTAGTTCCAAATA
ATGTGGAGTCCTACTGATGTTGTAGTGACTGTTCGACAGGCAAGAAACTTGTTGGTTAAA
GGAAAAAGTGGTTCCAATGAAGCATATGCTACTATTGAGTTCTGCAAAGATAAATATTTA
ACCTCCACAGATAAATCGACGACTCCTCGATGGTTCACACAGTGTTCATTCACCCTGCCA
CAAGGTGGTGTCTTTCACAACAAGATAGTTGTCCATGTTACTGTAATGAACAAGAGACAT
GGAAAACTGGGCTTGGAATCCGACGACTTTCTCGGCCAAGTTTCAGTCCCTTTATCAGCA
CTCAACTCGTGTGACAACAAGGAACGTGCAAGATGGTACGAGTTAAATGGCAAAAAGAGT
GGAAATAAAAAAGAGAGAGGGGAAGTAGAGATTTCATTCAAATTCATCAGCCAGGAAAAG
AGCCAAGTCCTCCCTGTTAAAAAAGAGAAACCAATGAAGATCATCAGTACTGGCTTCCGG
AGTAAGCTGCGAAGAAGATCAGAAGATGAGGATTCAGGTGTCGGGATCAGTGACGGGGAT
CGAACATCTAGCATGGGAAGAGGCAGATCATATGAGAATCTATCAATGCCTTCAATAACT
GACCAGCCTATGCCGACTCCGTTTGAAAGAACTTTCCGCACAAGTTCAACGAACAGCTCT
CCTGGTTCATTAGTATCAGCAAGAGGGTCTGCAAAATTAAAAAACAGCAACCTATCTTCA
AAAGCCATGAGTGTAGAAGTGCTTCATCGCCCTCCAACCAACCAAACCACCTCATTATAT
CGGTCTAACTCAGGTACAGGTGATTCTGGTCACGGTAGCAATGCAAGCTCTCCTGAAGTA
AAACCTCGAAGCACATCTATGACAGATATTCACAAAGCTGATTGCCCCACCCATAACACA
CTAAACAAGAACGATTCAAACTCAGTGAAACGTAACGTCACACATGACTCGAGCCAAAGT
AGAATGAAACCAATCGCTCCCATCACAGCTTTATATAAACCAAAAAATTATTATCGTTTA
GATGTCAAAGAACTTGGAAAAGTGTCCACCATACATGAGGAACCAGACACTACATTACAA
ACAATGTCACATAAAGACCTTGTTAAGTTGGCAAGCAAACAGAAGATGATAATTGCCGAC
AAGAACCAAACTATAAGGGAGTTAGAAGATTACATTGACAGCCTTCTAGTCAAAGTAATG
GTTTGTACACCAGATATACTGGATGTTCAGAGCAGCCATATCACTAAACTGTGAACATTG
ATATACGATTAGGAAATATCATTTGTAGAGAAAACGGTGCTTACGTATTTTCATATCAAA
TTTATTTTTACCCCATAGCGCTCACACCATACCTTTTCTTTTTATTGTTTTTTTTCAACC
TTTTTTTCGGAATGTTTTTTTTTTGATCTGAATCTGAAGCAATGGATTTCTACTTGCATT
GTTTTTAAGCAATAATCTGTTTTTGGGAAAAAACTAAAATAATAAATTTTCAATTTCTAT
AGCATAGTGTTAATTTTATCCCTGTGTTGCAAAATCACATCAGTGTAATGTATTATAAAC
CCCTCGGTGAATTATTTACTTATTCTAATTTCTTTACCTTTTGCTCTTTTAACATTTTTT
TATGGTGCACCATGTTTGTCGTGCTTAATGATTATAAAAAGCTGCAAGTTCGCAAAGTGA
GTTATTTTGCCAAACTTCATATTGACTAAATGTTATTGCGCTACATGTTCACTTTTTTTA
AATAGCCTGTATTTTCTTTAATATCAACCGTACAAAACTATTTTTATGTTATTGCTAGTT
TGTGTTTACCTTCTGTTGTTGTTCTGCCTTACCTTGAAGCAAAATGTATATTTGTGAGAT
TAAAATAGTACAGTTCTGT
| PANTHER |
FIP_classI (IPR037789) - T[4-261] 2.2E-103 - T[285-327] 2.2E-103 - T[343-419] 2.2E-103 |
| Gene3D |
C2_domain_sf (IPR035892) - T[8-158] 6.6E-20 |
| SMART |
C2_dom (IPR000008) - T[9-113] 7.8E-8 |
| Pfam |
C2_dom (IPR000008) - T[10-118] 2.1E-13 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[10-98] 8.858 |
| ProSiteProfiles |
Rab-bd_FIP-RBD (IPR019018) - T[351-413] 9.489 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[367-412] 5.9E-10 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[383-413] 7.32E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 37.143 % | 93.6 | 2.45E-20 |
| RFIP2_HUMAN | 37.143 % | 90.9 | 1.08E-19 |