- Transcript 'KH2012:KH.S389.1.v2....' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Clone 'cien213091' >
- Clone 'cilv030a14' >
- Transcript 'KH2012:KH.C8.273.v2....'
Transcript Model
Transcript Id
KH2012:KH.C8.273.v2.A.SL2-1
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
KhC8 [4,706,158 / 4,715,263]
Amino acid sequence
Length: 420
>KH.C8.273.v2.A.SL2-1
FQIMWSPTDVVVTVRQARNLLVKGKSGSNEAYATIEFCKDKYLTSTDKSTTPRWFTQCSF
TLPQGGVFHNKIVVHVTVMNKRHGKLGLESDDFLGQVSVPLSALNSCDNKERARWYELNG
KKSGNKKERGEVEISFKFISQEKSQVLPVKKEKPMKIISTGFRSKLRRRSEDEDSGVGIS
DGDRTSSMGRGRSYENLSMPSITDQPMPTPFERTFRTSSTNSSPGSLVSARGSAKLKNSN
LSSKAMSVEVLHRPPTNQTTSLYRSNSGTGDSGHGSNASSPEVKPRSTSMTDIHKADCPT
HNTLNKNDSNSVKRNVTHDSSQSRMKPIAPITALYKPKNYYRLDVKELGKVSTIHEEPDT
TLQTMSHKDLVKLASKQKMIIADKNQTIRELEDYIDSLLVKVMVCTPDILDVQSSHITKL
Nucleotide sequence
Length: 1,909
>KH2012:KH.C8.273.v2.A.SL2-1
TATATATACAGATATTTGTAGTTCCAAATAATGTGGAGTCCTACTGATGTTGTAGTGACT
GTTCGACAGGCAAGAAACTTGTTGGTTAAAGGAAAAAGTGGTTCCAATGAAGCATATGCT
ACTATTGAGTTCTGCAAAGATAAATATTTAACCTCCACAGATAAATCGACGACTCCTCGA
TGGTTCACACAGTGTTCATTCACCCTGCCACAAGGTGGTGTCTTTCACAACAAGATAGTT
GTCCATGTTACTGTAATGAACAAGAGACATGGAAAACTGGGCTTGGAATCCGACGACTTT
CTCGGCCAAGTTTCAGTCCCTTTATCAGCACTCAACTCGTGTGACAACAAGGAACGTGCA
AGATGGTACGAGTTAAATGGCAAAAAGAGTGGAAATAAAAAAGAGAGAGGGGAAGTAGAG
ATTTCATTCAAATTCATCAGCCAGGAAAAGAGCCAAGTCCTCCCTGTTAAAAAAGAGAAA
CCAATGAAGATCATCAGTACTGGCTTCCGGAGTAAGCTGCGAAGAAGATCAGAAGATGAG
GATTCAGGTGTCGGGATCAGTGACGGGGATCGAACATCTAGCATGGGAAGAGGCAGATCA
TATGAGAATCTATCAATGCCTTCAATAACTGACCAGCCTATGCCGACTCCGTTTGAAAGA
ACTTTCCGCACAAGTTCAACGAACAGCTCTCCTGGTTCATTAGTATCAGCAAGAGGGTCT
GCAAAATTAAAAAACAGCAACCTATCTTCAAAAGCCATGAGTGTAGAAGTGCTTCATCGC
CCTCCAACCAACCAAACCACCTCATTATATCGGTCTAACTCAGGTACAGGTGATTCTGGT
CACGGTAGCAATGCAAGCTCTCCTGAAGTAAAACCTCGAAGCACATCTATGACAGATATT
CACAAAGCTGATTGCCCCACCCATAACACACTAAACAAGAACGATTCAAACTCAGTGAAA
CGTAACGTCACACATGACTCGAGCCAAAGTAGAATGAAACCAATCGCTCCCATCACAGCT
TTATATAAACCAAAAAATTATTATCGTTTAGATGTCAAAGAACTTGGAAAAGTGTCCACC
ATACATGAGGAACCAGACACTACATTACAAACAATGTCACATAAAGACCTTGTTAAGTTG
GCAAGCAAACAGAAGATGATAATTGCCGACAAGAACCAAACTATAAGGGAGTTAGAAGAT
TACATTGACAGCCTTCTAGTCAAAGTAATGGTTTGTACACCAGATATACTGGATGTTCAG
AGCAGCCATATCACTAAACTGTGAACATTGATATACGATTAGGAAATATCATTTGTAGAG
AAAACGGTGCTTACGTATTTTCATATCAAATTTATTTTTACCCCATAGCGCTCACACCAT
ACCTTTTCTTTTTATTGTTTTTTTTCAACCTTTTTTTCGGAATGTTTTTTTTTTGATCTG
AATCTGAAGCAATGGATTTCTACTTGCATTGTTTTTAAGCAATAATCTGTTTTTGGGAAA
AAACTAAAATAATAAATTTTCAATTTCTATAGCATAGTGTTAATTTTATCCCTGTGTTGC
AAAATCACATCAGTGTAATGTATTATAAACCCCTCGGTGAATTATTTACTTATTCTAATT
TCTTTACCTTTTGCTCTTTTAACATTTTTTTATGGTGCACCATGTTTGTCGTGCTTAATG
ATTATAAAAAGCTGCAAGTTCGCAAAGTGAGTTATTTTGCCAAACTTCATATTGACTAAA
TGTTATTGCGCTACATGTTCACTTTTTTTAAATAGCCTGTATTTTCTTTAATATCAACCG
TACAAAACTATTTTTATGTTATTGCTAGTTTGTGTTTACCTTCTGTTGTTGTTCTGCCTT
ACCTTGAAGCAAAATGTATATTTGTGAGATTAAAATAGTACAGTTCTGT
| PANTHER |
FIP_classI (IPR037789) - T[4-261] 2.2E-103 - T[285-327] 2.2E-103 - T[343-419] 2.2E-103 |
| Gene3D |
C2_domain_sf (IPR035892) - T[8-158] 6.6E-20 |
| SMART |
C2_dom (IPR000008) - T[9-113] 7.8E-8 |
| Pfam |
C2_dom (IPR000008) - T[10-118] 2.1E-13 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[10-98] 8.858 |
| ProSiteProfiles |
Rab-bd_FIP-RBD (IPR019018) - T[351-413] 9.489 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[367-412] 5.9E-10 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[383-413] 7.32E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 37.143 % | 93.6 | 2.45E-20 |
| RFIP2_HUMAN | 37.143 % | 90.9 | 1.08E-19 |