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  1. Transcript 'KH2012:KH.C8.273.v3....'

Transcript Model

Transcript Id

KH2012:KH.C8.273.v3.A.ND3-1

Possible name(s)

RAB11FIP1; RAB11FIP2; RAB11FIP5

Location

KhC8 [4,706,158 / 4,709,413]

Sequences

Amino acid sequence

Length: 213

>KH.C8.273.v3.A.ND3-1
GGNSVGGGSKNTLQVPVIKKHIRNHSLPENHLKTVLGQLRKNDQASKSALCVNGSHFYVP
GTGDSGHGSNASSPEVKPRSTSMTDIHKADCPTHNTLNKNDSNSVKRNVTHDSSQSRMKP
IAPITALYKPKNYYRLDVKELGKVSTIHEEPDTTLQTMSHKDLVKLASKQKMIIADKNQT
IRELEDYIDSLLVKVMVCTPDILDVQSSHITKL

Nucleotide sequence

Length: 1,268

>KH2012:KH.C8.273.v3.A.ND3-1
AGGTGGCAACAGTGTTGGTGGTGGTAGTAAGAACACTTTACAAGTACCGGTGATTAAAAA
GCACATTAGGAACCATTCGCTGCCCGAAAATCACTTAAAAACCGTTCTCGGACAACTGAG
GAAAAATGACCAAGCTTCAAAAAGTGCTCTCTGTGTGAATGGCTCACATTTCTATGTACC
AGGTACAGGTGATTCTGGTCACGGTAGCAATGCAAGCTCTCCTGAAGTAAAACCTCGAAG
CACATCTATGACAGATATTCACAAAGCTGATTGCCCCACCCATAACACACTAAACAAGAA
CGATTCAAACTCAGTGAAACGTAACGTCACACATGACTCGAGCCAAAGTAGAATGAAACC
AATCGCTCCCATCACAGCTTTATATAAACCAAAAAATTATTATCGTTTAGATGTCAAAGA
ACTTGGAAAAGTGTCCACCATACATGAGGAACCAGACACTACATTACAAACAATGTCACA
TAAAGACCTTGTTAAGTTGGCAAGCAAACAGAAGATGATAATTGCCGACAAGAACCAAAC
TATAAGGGAGTTAGAAGATTACATTGACAGCCTTCTAGTCAAAGTAATGGTTTGTACACC
AGATATACTGGATGTTCAGAGCAGCCATATCACTAAACTGTGAACATTGATATACGATTA
GGAAATATCATTTGTAGAGAAAACGGTGCTTACGTATTTTCATATCAAATTTATTTTTAC
CCCATAGCGCTCACACCATACCTTTTCTTTTTATTGTTTTTTTTCAACCTTTTTTTCGGA
ATGTTTTTTTTTTGATCTGAATCTGAAGCAATGGATTTCTACTTGCATTGTTTTTAAGCA
ATAATCTGTTTTTGGGAAAAAACTAAAATAATAAATTTTCAATTTCTATAGCATAGTGTT
AATTTTATCCCTGTGTTGCAAAATCACATCAGTGTAATGTATTATAAACCCCTCGGTGAA
TTATTTACTTATTCTAATTTCTTTACCTTTTGCTCTTTTAACATTTTTTTATGGTGCACC
ATGTTTGTCGTGCTTAATGATTATAAAAAGCTGCAAGTTCGCAAAGTGAGTTATTTTGCC
AAACTTCATATTGACTAAATGTTATTGCGCTACATGTTCACTTTTTTTAAATAGCCTGTA
TTTTCTTTAATATCAACCGTACAAAACTATTTTTATGTTATTGCTAGTTTGTGTTTACCT
TCTGTTGTTGTTCTGCCTTACCTTGAAGCAAAATGTATATTTGTGAGATTAAAATAGTAC
AGTTCTGT

InterProScan

PANTHER
FIP_classI (IPR037789) - T[9-84] 5.0E-35 - T[86-120] 5.0E-35 - T[136-212] 5.0E-35
ProSiteProfiles
Rab-bd_FIP-RBD (IPR019018) - T[144-206] 9.489
Pfam
Rab-bd_FIP-RBD (IPR019018) - T[160-205] 2.2E-10
SUPERFAMILY
FIP-RBD_C_sf (IPR037245) - T[176-206] 2.62E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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