- Transcript 'KH2012:KH.L96.46.v1....' >
- Transcript 'KH2012:KH.C2.141.v2....' >
- Transcript 'KH2012:KH.C8.359.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.359.v1.A.SL2-1
Possible name(s)
DHH; IHH; SHH
Gene model
Location
KhC8 [1,633,951 / 1,643,097]
Amino acid sequence
Length: 571
>KH.C8.359.v1.A.SL2-1
IGRYQCIRLKDNINMLEDLDSVQARLSPDNVNSTQDCCNENGSRTPAASCNQTVLQRFTN
LICTCNLRRRQLQRLCFSTRKHKSHRSGAGYCTLLPTCASIRVHIAGFLAWTLLVAPLLS
GIAMDTRLLRRRSSLGGVSMCGACRPGHGSGGSRMPGRELVPFLKGEYVPKMSEQTIGAS
GPVTGRIRADTPRFRQELVPNWNTDIEFRDEEESNEDRFMTPICRARLDYLAILVANQWA
RVKLKVLEAWDDGNDKANDPLHYEGRAVDITTDDADRNKYPILARLAVVAGFDWVKYDGK
VVHCSVKSEESDAAKYGGCFPGESTVIVPGEGHVPISSLQPGDQVLAIDKSGAVITDTFL
SFMDARSDIVSGHQAYRQMVEITTENGFSVTLTRNHLIYVSKPTYDASLLTATSNATQQN
NERLGLQDFTSPHSSFAAKVRQGDYIYTLPNSHTGPDTPSATVRPSRVVSVRTIETASGA
YAPLTYSGTIIVGGTAASCYAVIESDVIAHTVVSPFRYYHWLSLWFNGDSKDHRNCTHVG
PVRPTDGISLYSKLLHQIFSKVLPSWFFWAE
Nucleotide sequence
Length: 2,327
>KH2012:KH.C8.359.v1.A.SL2-1
TATATAGATAGGTAGATATCAATGTATAAGGCTGAAAGATAATATAAATATGCTAGAAGA
TCTGGATTCTGTTCAAGCTCGTCTTTCACCGGACAATGTCAACTCAACGCAAGACTGCTG
TAACGAAAATGGCAGCAGAACCCCCGCTGCTTCGTGCAATCAAACTGTACTCCAACGCTT
CACGAACTTGATCTGTACATGCAACCTACGGCGACGTCAGCTGCAGCGGCTCTGCTTCTC
AACCCGCAAACATAAATCGCATCGGTCAGGTGCTGGCTACTGTACCTTGCTACCGACCTG
CGCCTCCATACGAGTCCACATTGCAGGCTTCCTGGCGTGGACGCTGCTCGTAGCCCCTTT
GCTCAGCGGCATAGCCATGGACACAAGACTGCTTAGGCGCCGATCAAGCCTGGGCGGGGT
GTCGATGTGTGGCGCGTGCCGACCCGGGCACGGAAGCGGCGGCTCTCGGATGCCGGGTCG
GGAGCTTGTGCCGTTCTTGAAAGGTGAATACGTGCCGAAAATGTCCGAGCAGACGATCGG
GGCAAGCGGGCCGGTCACCGGGCGCATTAGAGCTGATACTCCCCGATTTCGACAAGAGCT
GGTGCCGAATTGGAACACAGATATCGAGTTCCGGGACGAGGAAGAAAGCAATGAGGATCG
CTTCATGACCCCGATATGCAGAGCTAGACTGGACTACCTTGCAATCCTCGTAGCGAACCA
ATGGGCGCGTGTCAAACTGAAAGTTCTCGAAGCATGGGACGATGGGAACGATAAAGCCAA
CGACCCTTTGCATTATGAAGGTCGAGCCGTTGATATAACGACTGATGATGCAGACAGAAA
TAAATATCCGATTCTTGCTCGGCTTGCAGTTGTGGCAGGGTTCGATTGGGTAAAATATGA
CGGAAAGGTCGTCCACTGCTCCGTCAAGTCTGAGGAATCGGACGCAGCGAAATATGGAGG
ATGCTTTCCTGGTGAGTCAACCGTGATCGTTCCTGGTGAAGGACATGTCCCAATCTCCAG
TCTGCAACCTGGAGACCAAGTGCTTGCTATAGACAAGAGCGGTGCAGTCATCACTGACAC
TTTCCTCTCGTTTATGGATGCACGAAGTGATATCGTTTCAGGACACCAAGCTTATCGCCA
AATGGTAGAGATCACAACAGAGAATGGCTTCTCTGTTACATTGACACGAAATCACTTGAT
ATACGTATCTAAGCCAACATATGACGCTTCCCTGTTGACTGCAACATCAAATGCAACACA
GCAAAACAACGAACGACTCGGTCTCCAAGATTTCACTTCACCGCATTCCAGCTTTGCTGC
CAAAGTACGCCAGGGCGACTACATCTACACACTCCCCAATTCGCATACTGGTCCCGACAC
CCCTAGCGCCACCGTACGGCCGTCTCGTGTTGTGAGCGTACGAACCATTGAAACTGCAAG
TGGAGCATATGCCCCACTTACATACAGTGGTACCATCATAGTAGGTGGAACAGCAGCGTC
ATGTTACGCCGTCATCGAAAGTGACGTCATAGCGCACACGGTGGTTTCCCCGTTTCGTTA
CTACCATTGGTTAAGCTTATGGTTTAACGGTGACAGCAAAGACCACCGAAACTGTACACA
CGTCGGACCAGTGCGGCCGACCGATGGCATATCGTTATATTCTAAGTTATTGCACCAGAT
TTTTTCAAAGGTTTTGCCCAGTTGGTTTTTCTGGGCGGAGTAGACTGCTATGCGTGCGAG
AGGCCCTTCTGGGGTCGTAAACAGAAAAGCATTTAAACTAAGTCTGTAATATTTAAGTAC
AACCGTACAGAGCTGCCACGCTCCATGTAGTAAGGTTGGGGAAAATGGGACACCTTTTCA
CTCTATTTTCTCGTTCCATTTGGCAGTAAACAAACAACATTCAAAGAATTATAAAACCGT
ATCCTCACGACTTCCATAAACCGTTCTTAATTGTTTAAAACACGGTATTTGGATATTATG
TGCTGAAGGTGTCCCGTCTCCCCCTACAGTACTATATATACTGAAGTGGAATCGCTACTT
TGAAATCATTATTCCCCGTTTCATTTATACTTAAACTTCAATGCTGTTGTTATTTCTTTG
TTTCTTTTTTAATTTACCGTTCCCGATTGCACATACATATCTCGTCATTTTATCTGCGTT
TCCTTTTCATGTTTCCTATTTTTATACCCTTCTTATCTTATATTATTGTTGTTGTATTTT
CTTGTCAGCAAAGTGCTTTAATGGTTTCTTCACGCCTCGCTTCTTCAATGCGCATGAGGT
TAAGATGACGACATGTACTTTTCGAATTAAAGGATGATGAGATCAGC
| Gene3D |
Hedgehog_sig/DD-Pept_Zn-bd_sf (IPR009045) - T[141-309] 2.0E-61 |
| Pfam |
Hedgehog_signalling_dom (IPR000320) - T[144-305] 1.1E-71 |
| SUPERFAMILY |
Hedgehog_sig/DD-Pept_Zn-bd_sf (IPR009045) - T[160-314] 1.31E-64 |
| PRINTS |
Hedgehog (IPR001657) - T[219-237] 1.3E-39 - T[239-256] 1.3E-39 - T[259-281] 1.3E-39 - T[283-304] 1.3E-39 - T[479-493] 1.3E-39 - T[495-518] 1.3E-39 - T[547-563] 1.3E-39 |
| Pfam |
Hint_dom (IPR001767) - T[308-563] 4.8E-75 |
| SMART |
Hint_dom_N (IPR003587) - T[317-450] 4.1E-16 |
| ProSiteProfiles |
Intein_N (IPR006141) - T[319-400] 9.689 |
| SUPERFAMILY |
Hint_dom_sf (IPR036844) - T[319-501] 8.41E-30 |
| TIGRFAM |
Intein_N (IPR006141) - T[319-400] 6.0E-6 |
| SMART |
Hint_dom_C (IPR003586) - T[460-505] 1.3E-5 |