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TRANSCRIPT CARD

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  1. EST 'AV992885' > 
  2. Transcript 'KH2012:KH.C8.370.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.370.v1.A.nonSL5-1

Possible name(s)

GTSF1; GTSF1L

Gene model

KH2012:KH.C8.370

Location

KhC8 [1,552,589 / 1,556,513]

Sequences

Amino acid sequence

Length: 297

>KH.C8.370.v1.A.nonSL5-1
LYTRHKKVGKMDFESPYHVPVYMQSMQDSNKDEMVICPYDPVHRISVKRFVRHIHKCKKN
HPNANMATCPFNARHIIPKPEMEQHIEICPDKDSDINFMVAESEISVIPTSYEELYFGDE
EDWDEEARNNTQSLPMVRGRRRQKRNEINPFPSVYEAEALHKEEEIEPRECPAPPVRQRR
PIPQSVTQNGIHQEQKPSNMQLPPTPSPKSIPVMAAKFTNPVQQNGESAINDKTMVQKTL
LHEKRKLNKLLNQISNMESQQTAGEVLNSDQLEKIGRKSAMKSRLLEVENLLERITL

Nucleotide sequence

Length: 1,739

>KH2012:KH.C8.370.v1.A.nonSL5-1
TTTACTCTTCGCTGCTCAGCTTGAAAGAAGGACTTTTTAACTCTACACAAGACACAAGAA
AGTAGGAAAAATGGATTTCGAATCACCGTACCATGTTCCCGTATACATGCAGTCAATGCA
AGATTCAAACAAAGATGAAATGGTGATATGCCCTTATGATCCCGTGCATAGAATCTCCGT
AAAAAGATTTGTGCGACACATACACAAGTGCAAAAAGAATCACCCGAACGCAAACATGGC
CACGTGTCCATTCAATGCAAGACATATTATTCCAAAACCAGAGATGGAACAGCACATTGA
AATATGCCCGGACAAGGACTCTGACATTAACTTCATGGTAGCCGAAAGTGAGATTTCTGT
CATCCCAACAAGTTATGAGGAACTTTACTTTGGGGATGAGGAAGATTGGGATGAAGAGGC
TCGCAACAATACTCAAAGTCTGCCGATGGTTCGTGGACGTAGAAGACAAAAGCGAAATGA
AATAAACCCGTTTCCATCTGTGTATGAGGCTGAAGCTCTACATAAAGAAGAAGAAATAGA
ACCAAGAGAGTGTCCTGCCCCTCCAGTTAGACAAAGGCGACCCATTCCACAATCTGTTAC
TCAGAATGGAATACATCAAGAGCAGAAACCGAGCAATATGCAATTGCCTCCAACACCAAG
TCCCAAAAGTATCCCAGTAATGGCAGCCAAGTTTACAAACCCAGTTCAACAAAATGGTGA
ATCAGCCATTAATGATAAAACTATGGTTCAAAAGACGTTGCTGCATGAAAAGAGAAAACT
AAACAAACTGTTGAATCAGATAAGCAACATGGAGTCACAGCAAACTGCTGGCGAGGTTCT
TAACTCCGACCAGCTTGAAAAAATAGGACGAAAATCAGCTATGAAAAGTAGACTGTTAGA
GGTGGAGAATTTGCTGGAAAGAATTACCTTGTGAATATATAACCATGCCACCTCTTTGTG
CTAAGTAACCATGTCACCTCTTTGTGCTAAGTACTATGTTTCCTACCAGTTTAGTATGAA
ACTACCTTCCTTTCCTATGTTATGTTTTAGTTATATAGTAGGGTGGGGGAAGATGGGACA
CCTTTAGCACAAAATATATAAATATCCTGATCGTGTTTTGAACAATTAACAGCGGTTTAT
GAAAGTCGCAAGGACAAGGTTTTATAATTCTTTAAATATTCTTTGTTTGCTACCAAAATG
TACGAGAAAATAGAATGAAAAGGTGTCCCACCTTCCCCCATCCTACTATACAACATCTTA
AACCGCTTTTTTTTATTACACATACACCAAACTGTTTTTCTACTAATACTTTTGCTTGTG
TTTACGTTTTGATAGAACTACTGCTTTACATTTTGTTACACTTCATATTGCCATATGGTG
CTATTTCTTTCACATTATGTTATCAACACACTGCTTTTAGAGTCTCTTTCTCACACGATT
TTATTTCTCAGGTTTTTTTTGTACCGCACCGCTTTCGTTTATTAATACAGCAAACTGATT
TTATACTAATAATAATTACTCTTTGCCCAAAAGCTTTAGGGCTGTTTTTAAACTCAAGGT
TTTTTGTACCCATACCGCTTTTTTTATAAAAACAGCGAACTGATTTTAAACCATTAATAA
TTGTTGCTTCGCACAAAAGCATTAGGGCTGTTTTTAAACTCATACAAATTTAATCCCATT
TCCCAGGTGAACATCATTTAATAAATCAAAACATAATTTTCATGCATAAATTAGCACAA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[32-65] 4.64E-7 - T[65-96] 6.55E-5
ProSiteProfiles
TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-61] 15.312 - T[66-93] 16.479
Pfam
TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-58] 7.1E-7 - T[66-90] 3.1E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GTSF1_HUMAN 37.5 % 75.1 1.92E-16