Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.370.v1.A.nonSL8-1

Possible name(s)

GTSF1; GTSF1L

Gene model

KH2012:KH.C8.370

Location

KhC8 [1,552,589 / 1,556,510]

Sequences

Amino acid sequence

Length: 297

>KH.C8.370.v1.A.nonSL8-1
LYTRHKKVGKMDFESPYHVPVYMQSMQDSNKDEMVICPYDPVHRISVKRFVRHIHKCKKN
HPNANMATCPFNARHIIPKPEMEQHIEICPDKDSDINFMVAESEISVIPTSYEELYFGDE
EDWDEEARNNTQSLPMVRGRRRQKRNEINPFPSVYEAEALHKEEEIEPRECPAPPVRQRR
PIPQSVTQNGIHQEQKPSNMQLPPTPSPKSIPVMAAKFTNPVQQNGESAINDKTMVQKTL
LHEKRKLNKLLNQISNMESQQTAGEVLNSDQLEKIGRKSAMKSRLLEVENLLERITL

Nucleotide sequence

Length: 1,736

>KH2012:KH.C8.370.v1.A.nonSL8-1
ACTCTTCGCTGCTCAGCTTGAAAGAAGGACTTTTTAACTCTACACAAGACACAAGAAAGT
AGGAAAAATGGATTTCGAATCACCGTACCATGTTCCCGTATACATGCAGTCAATGCAAGA
TTCAAACAAAGATGAAATGGTGATATGCCCTTATGATCCCGTGCATAGAATCTCCGTAAA
AAGATTTGTGCGACACATACACAAGTGCAAAAAGAATCACCCGAACGCAAACATGGCCAC
GTGTCCATTCAATGCAAGACATATTATTCCAAAACCAGAGATGGAACAGCACATTGAAAT
ATGCCCGGACAAGGACTCTGACATTAACTTCATGGTAGCCGAAAGTGAGATTTCTGTCAT
CCCAACAAGTTATGAGGAACTTTACTTTGGGGATGAGGAAGATTGGGATGAAGAGGCTCG
CAACAATACTCAAAGTCTGCCGATGGTTCGTGGACGTAGAAGACAAAAGCGAAATGAAAT
AAACCCGTTTCCATCTGTGTATGAGGCTGAAGCTCTACATAAAGAAGAAGAAATAGAACC
AAGAGAGTGTCCTGCCCCTCCAGTTAGACAAAGGCGACCCATTCCACAATCTGTTACTCA
GAATGGAATACATCAAGAGCAGAAACCGAGCAATATGCAATTGCCTCCAACACCAAGTCC
CAAAAGTATCCCAGTAATGGCAGCCAAGTTTACAAACCCAGTTCAACAAAATGGTGAATC
AGCCATTAATGATAAAACTATGGTTCAAAAGACGTTGCTGCATGAAAAGAGAAAACTAAA
CAAACTGTTGAATCAGATAAGCAACATGGAGTCACAGCAAACTGCTGGCGAGGTTCTTAA
CTCCGACCAGCTTGAAAAAATAGGACGAAAATCAGCTATGAAAAGTAGACTGTTAGAGGT
GGAGAATTTGCTGGAAAGAATTACCTTGTGAATATATAACCATGCCACCTCTTTGTGCTA
AGTAACCATGTCACCTCTTTGTGCTAAGTACTATGTTTCCTACCAGTTTAGTATGAAACT
ACCTTCCTTTCCTATGTTATGTTTTAGTTATATAGTAGGGTGGGGGAAGATGGGACACCT
TTAGCACAAAATATATAAATATCCTGATCGTGTTTTGAACAATTAACAGCGGTTTATGAA
AGTCGCAAGGACAAGGTTTTATAATTCTTTAAATATTCTTTGTTTGCTACCAAAATGTAC
GAGAAAATAGAATGAAAAGGTGTCCCACCTTCCCCCATCCTACTATACAACATCTTAAAC
CGCTTTTTTTTATTACACATACACCAAACTGTTTTTCTACTAATACTTTTGCTTGTGTTT
ACGTTTTGATAGAACTACTGCTTTACATTTTGTTACACTTCATATTGCCATATGGTGCTA
TTTCTTTCACATTATGTTATCAACACACTGCTTTTAGAGTCTCTTTCTCACACGATTTTA
TTTCTCAGGTTTTTTTTGTACCGCACCGCTTTCGTTTATTAATACAGCAAACTGATTTTA
TACTAATAATAATTACTCTTTGCCCAAAAGCTTTAGGGCTGTTTTTAAACTCAAGGTTTT
TTGTACCCATACCGCTTTTTTTATAAAAACAGCGAACTGATTTTAAACCATTAATAATTG
TTGCTTCGCACAAAAGCATTAGGGCTGTTTTTAAACTCATACAAATTTAATCCCATTTCC
CAGGTGAACATCATTTAATAAATCAAAACATAATTTTCATGCATAAATTAGCACAA

InterProScan

SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[32-65] 4.64E-7 - T[65-96] 6.55E-5
ProSiteProfiles	TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-61] 15.312 - T[66-93] 16.479
Pfam	TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-58] 7.1E-7 - T[66-90] 3.1E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GTSF1_HUMAN	37.5 %	75.1	1.92E-16