Aniseed - Transcript Card

Transcript 'KH2012:KH.C8.370.v2....'

Transcript Model

Transcript Id

KH2012:KH.C8.370.v2.A.nonSL6-1

Possible name(s)

GTSF1; GTSF1L

Gene model

KH2012:KH.C8.370

Location

KhC8 [1,552,589 / 1,556,482]

Sequences

Amino acid sequence

Length: 297

>KH.C8.370.v2.A.nonSL6-1
LYTRHKKVGKMDFESPYHVPVYMQSMQDSNKDEMVICPYDPVHRISVKRFVRHIHKCKKN
HPNANMATCPFNARHIIPKPEMEQHIEICPDKDSDINFMVAESEISVIPTSYEELYFGDE
EDWDEEARNNTQSLPMVRGRRRQKRNEINPFPSVYEAEALHKEEEIEPRECPAPPVRQRR
PIPQSVTQNGIHQEQKPSNMQLPPTPSPKSIPVMAAKFTNPVQQNGESAINDKTMVQKTL
LHEKRKLNKLLNQISNMESQQTAGEVLNSDQLEKIGRKSAMKSRLLEVENLLERITL

Nucleotide sequence

Length: 1,503

>KH2012:KH.C8.370.v2.A.nonSL6-1
ACTTTTTAACTCTACACAAGACACAAGAAAGTAGGAAAAATGGATTTCGAATCACCGTAC
CATGTTCCCGTATACATGCAGTCAATGCAAGATTCAAACAAAGATGAAATGGTGATATGC
CCTTATGATCCCGTGCATAGAATCTCCGTAAAAAGATTTGTGCGACACATACACAAGTGC
AAAAAGAATCACCCGAACGCAAACATGGCCACGTGTCCATTCAATGCAAGACATATTATT
CCAAAACCAGAGATGGAACAGCACATTGAAATATGCCCGGACAAGGACTCTGACATTAAC
TTCATGGTAGCCGAAAGTGAGATTTCTGTCATCCCAACAAGTTATGAGGAACTTTACTTT
GGGGATGAGGAAGATTGGGATGAAGAGGCTCGCAACAATACTCAAAGTCTGCCGATGGTT
CGTGGACGTAGAAGACAAAAGCGAAATGAAATAAACCCGTTTCCATCTGTGTATGAGGCT
GAAGCTCTACATAAAGAAGAAGAAATAGAACCAAGAGAGTGTCCTGCCCCTCCAGTTAGA
CAAAGGCGACCCATTCCACAATCTGTTACTCAGAATGGAATACATCAAGAGCAGAAACCG
AGCAATATGCAATTGCCTCCAACACCAAGTCCCAAAAGTATCCCAGTAATGGCAGCCAAG
TTTACAAACCCAGTTCAACAAAATGGTGAATCAGCCATTAATGATAAAACTATGGTTCAA
AAGACGTTGCTGCATGAAAAGAGAAAACTAAACAAACTGTTGAATCAGATAAGCAACATG
GAGTCACAGCAAACTGCTGGCGAGGTTCTTAACTCCGACCAGCTTGAAAAAATAGGACGA
AAATCAGCTATGAAAAGTAGACTGTTAGAGGTGGAGAATTTGCTGGAAAGAATTACCTTG
TGAATATATAACCATGCCACCTCTTTGTGCTAAGTAACCATGTCACCTCTTTGTGCTAAG
TACTATGTTTCCTACCAAATGAAAAGGTGTCCCACCTTCCCCCATCCTACTATACAACAT
CTTAAACCGCTTTTTTTTATTACACATACACCAAACTGTTTTTCTACTAATACTTTTGCT
TGTGTTTACGTTTTGATAGAACTACTGCTTTACATTTTGTTACACTTCATATTGCCATAT
GGTGCTATTTCTTTCACATTATGTTATCAACACACTGCTTTTAGAGTCTCTTTCTCACAC
GATTTTATTTCTCAGGTTTTTTTTGTACCGCACCGCTTTCGTTTATTAATACAGCAAACT
GATTTTATACTAATAATAATTACTCTTTGCCCAAAAGCTTTAGGGCTGTTTTTAAACTCA
AGGTTTTTTGTACCCATACCGCTTTTTTTATAAAAACAGCGAACTGATTTTAAACCATTA
ATAATTGTTGCTTCGCACAAAAGCATTAGGGCTGTTTTTAAACTCATACAAATTTAATCC
CATTTCCCAGGTGAACATCATTTAATAAATCAAAACATAATTTTCATGCATAAATTAGCA
CAA

InterProScan

SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[32-65] 4.64E-7 - T[65-96] 6.55E-5
ProSiteProfiles	TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-61] 15.312 - T[66-93] 16.479
Pfam	TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-58] 7.1E-7 - T[66-90] 3.1E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GTSF1_HUMAN	37.5 %	75.1	1.92E-16