- Region 'REG00001116' >
- Molecular Tool 'FOG::BMP2/4' >
- Clone 'citb099e03' >
- Transcript 'Cisavi.CG.ENS81.R4.1...' >
- Transcript 'KH2012:KH.C8.396.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.396.v1.A.nonSL5-1
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
KhC8 [2,622,957 / 2,625,590]
Amino acid sequence
Length: 423
>KH.C8.396.v1.A.nonSL5-1
IFQHRIRCVMMTVQCCVQYNTSEDKSDHKRFMMNRIESHGASRDNVIGSAYPQQQADAIL
QNWKSSAAGPTRNKHRDGESRSPVPGKPYQRPDVTKSSPNEMSAIECMRNAVQQMQEKVQ
ASAAKTTQHSALNDTYVDVTSLSSPATLVRESFRQNWLPKSPMVDERSSSPVSSEGNPPA
RCASLSGEDETREKDEELRKIGEEMEEYSNESKKNVKPPYSYIALITMSILQSPDKKLTL
SGICDFIMNRFPYYKEKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTMDPEAEDM
FDNGSFLRRRKRFKRQQRDPFRDNVLAALNAASPYGRPYGLAATQQAAIMAASMNPYAYM
NPLPAHIPLLPPHEINNRQAALMAFGSSRLPQMTTESSVSIFPTLPMQSNTEHGCENPSR
ELR
Nucleotide sequence
Length: 2,267
>KH2012:KH.C8.396.v1.A.nonSL5-1
ATATTTCAGCATCGAATCCGTTGTGTGATGATGACAGTGCAGTGTTGTGTGCAATATAAT
ACAAGCGAGGATAAGAGTGATCATAAACGTTTCATGATGAATCGTATTGAATCTCACGGA
GCATCACGAGATAATGTCATCGGTTCGGCCTACCCTCAACAACAAGCAGACGCCATTTTG
CAAAACTGGAAATCATCGGCGGCAGGTCCGACTCGAAACAAACATCGTGACGGGGAATCA
AGGTCGCCGGTCCCAGGCAAACCTTACCAAAGACCCGATGTCACAAAGTCATCACCAAAT
GAGATGTCAGCCATAGAATGCATGAGAAACGCAGTTCAACAGATGCAGGAAAAAGTTCAA
GCTTCAGCGGCAAAAACAACTCAACATTCAGCTTTGAACGATACCTACGTAGACGTGACA
TCATTATCGTCACCAGCCACCCTTGTACGAGAGTCGTTTCGCCAAAACTGGTTGCCGAAA
TCACCGATGGTGGACGAACGATCTTCGTCGCCTGTGTCGTCAGAGGGAAACCCCCCTGCC
CGCTGTGCGTCATTAAGCGGCGAGGACGAGACGAGAGAGAAAGATGAAGAATTAAGGAAG
ATCGGAGAAGAAATGGAAGAATATTCGAACGAATCAAAGAAGAATGTAAAACCTCCGTAT
TCATACATCGCTCTTATAACAATGTCGATACTTCAGTCTCCCGATAAGAAACTTACTCTG
AGTGGGATTTGCGATTTCATCATGAACCGTTTCCCTTATTACAAAGAGAAGTTCCCAGCT
TGGCAGAACTCGATACGTCATAACCTTTCACTGAACGACTGCTTCGTGAAAATTCCACGC
GAGCCTGGTAACCCTGGAAAGGGAAATTACTGGACCATGGATCCTGAGGCGGAAGATATG
TTCGACAATGGTTCCTTTCTACGAAGAAGAAAACGATTCAAACGACAACAGAGAGATCCG
TTCCGGGATAATGTCCTTGCAGCTTTGAATGCAGCTAGCCCTTACGGTCGTCCATACGGT
CTTGCAGCAACACAACAAGCAGCTATCATGGCAGCATCAATGAATCCATATGCTTACATG
AACCCACTGCCTGCACATATACCGTTGCTACCTCCGCATGAAATCAACAACAGACAAGCT
GCTTTAATGGCTTTTGGATCATCAAGGTTACCTCAGATGACGACCGAATCATCTGTGTCC
ATCTTCCCCACCCTTCCCATGCAATCCAACACTGAGCACGGATGCGAGAATCCAAGCCGC
GAACTTCGCTAACGCTGTTGCTCTTCACTCCGCTAGGGAATCCATTAGAGGGCAGCAACA
AGCCAAGAAACTTCCTCGTAATTCTCCTTTTTCCATCGAATCATTGATCGGAAAGTCCTC
CGATTCTGCTCCCACAACATCCGAACACCACGGCTCCGGATGTTCTTCTCCTTCCTCCCA
AACCTCCGGAAGAGAGAACCCGGTTTCTCCCGTTTCAAAACTCAACCCCGGATTCGGTCC
CTGTATCACTTCGACTCCGAAGTACTCCGGATCAGATCGGGAGCATTTTTTCCAAGAAAC
AGGAAGACGCGAATCCGAAGTCCGCGAATCTGCAGCGGCTGCTTCCCGAAGAAGTTCAGT
TTCACCATCAGACTCATTATCCCCTCCCCTGCCGGCTTCACAGCCTTCTTTTCCCGCGTT
GGGTAGCCAATTGAACCCAATGTTTCCATACAACATGGCGCTAAGTTCTCGTATGTTCCA
ACAGAACCAATCGTATCCACCAAACCCCTCTATCGCGCAATCGGCGCAACAGTTAAACGC
ACTATCAGCCGCAGGTTTTCTTCCGTCATTAAACGGCTGGCCTTGTTTTGGCAGAACTTA
AACAAAAAAATGCAATTTTACGCCAAAACCTCCACAGAAGTGGCAGCTGTGAAACCTGGT
ACATTTCTAAGCAATCATAAGCTTTATGTTGCTTACTACACTTCACTCCTTTAGTTATTA
AACCGTATATACTTCAGCGTGTTTAAATGCGACTCTAATTGGACCCATTAGCGTACAATG
CAACACCACCATATTGAAAATTATATTCCAAACATAATACACTGCCATTTATACTGAGAT
TATGTATTATATGCAGTACGCATTCCGCAATTACTATACCACACTGTCCATACACAATCT
CAGACCGTGGTTGTATCTATTTTAAGCATGACACAATTTTACGTTGTTTTCGTTTTTTTT
GACTTTTGTGTTTTTGTTCCGACAAATTAAAATTCTAAACTAAAAAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[203-312] 7.9E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[215-305] 1.9E-60 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[216-311] 1.86E-39 |
| CDD |
Fork_head_dom (IPR001766) - T[217-294] 6.6535E-52 |
| PRINTS |
Fork_head_dom (IPR001766) - T[217-230] 3.3E-22 - T[238-255] 3.3E-22 - T[261-278] 3.3E-22 |
| Pfam |
Fork_head_dom (IPR001766) - T[217-301] 2.2E-37 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[217-311] 39.54 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[261-267] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 76.786 % | 200 | 1.49E-59 |
| FOXD3_HUMAN | 75.362 % | 201 | 1.56E-59 |
| FOXD1_HUMAN | 87.778 % | 182 | 7.9E-53 |