- Transcript 'KH2012:KH.C8.396.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.396.v1.R.ND1-1
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
KhC8 [2,622,792 / 2,625,590]
Amino acid sequence
Length: 450
>KH.C8.396.v1.R.ND1-1
DSKKKAVAGRIEEVDLNKLSRFAKCSFIFQHRIRCVMMTVQCCVQYNTSEDKSDHKRFMM
NRIESHGASRDNVIGSAYPQQQADAILQNWKSSAAGPTRNKHRDGESRSPVPGKPYQRPD
VTKSSPNEMSAIECMRNAVQQMQEKVQASAAKTTQHSALNDTYVDVTSLSSPATLVRESF
RQNWLPKSPMVDERSSSPVSSEGNPPARCASLSGEDETREKDEELRKIGEEMEEYSNESK
KNVKPPYSYIALITMSILQSPDKKLTLSGICDFIMNRFPYYKEKFPAWQNSIRHNLSLND
CFVKIPREPGNPGKGNYWTMDPEAEDMFDNGSFLRRRKRFKRQQRDPFRDNVLAALNAAS
PYGRPYGLAATQQAAIMAASMNPYAYMNPLPAHIPLLPPHEINNRQAALMAFGSSRLPQM
TTESSVSIFPTLPMQSNTEHGCENPSRELR
Nucleotide sequence
Length: 2,432
>KH2012:KH.C8.396.v1.R.ND1-1
CCTTCTTCTTTTGCTTAGAAAACATTGTAATATAATCTTTTGAAAAATCTGTTGCTGATC
AACGGAATTATAAACGAGATCTAGGATTCGAAGAAAAAAGCGGTTGCTGGGAGAATTGAA
GAAGTGGATTTGAATAAATTGTCGCGTTTTGCAAAGTGCTCGTTCATATTTCAGCATCGA
ATCCGTTGTGTGATGATGACAGTGCAGTGTTGTGTGCAATATAATACAAGCGAGGATAAG
AGTGATCATAAACGTTTCATGATGAATCGTATTGAATCTCACGGAGCATCACGAGATAAT
GTCATCGGTTCGGCCTACCCTCAACAACAAGCAGACGCCATTTTGCAAAACTGGAAATCA
TCGGCGGCAGGTCCGACTCGAAACAAACATCGTGACGGGGAATCAAGGTCGCCGGTCCCA
GGCAAACCTTACCAAAGACCCGATGTCACAAAGTCATCACCAAATGAGATGTCAGCCATA
GAATGCATGAGAAACGCAGTTCAACAGATGCAGGAAAAAGTTCAAGCTTCAGCGGCAAAA
ACAACTCAACATTCAGCTTTGAACGATACCTACGTAGACGTGACATCATTATCGTCACCA
GCCACCCTTGTACGAGAGTCGTTTCGCCAAAACTGGTTGCCGAAATCACCGATGGTGGAC
GAACGATCTTCGTCGCCTGTGTCGTCAGAGGGAAACCCCCCTGCCCGCTGTGCGTCATTA
AGCGGCGAGGACGAGACGAGAGAGAAAGATGAAGAATTAAGGAAGATCGGAGAAGAAATG
GAAGAATATTCGAACGAATCAAAGAAGAATGTAAAACCTCCGTATTCATACATCGCTCTT
ATAACAATGTCGATACTTCAGTCTCCCGATAAGAAACTTACTCTGAGTGGGATTTGCGAT
TTCATCATGAACCGTTTCCCTTATTACAAAGAGAAGTTCCCAGCTTGGCAGAACTCGATA
CGTCATAACCTTTCACTGAACGACTGCTTCGTGAAAATTCCACGCGAGCCTGGTAACCCT
GGAAAGGGAAATTACTGGACCATGGATCCTGAGGCGGAAGATATGTTCGACAATGGTTCC
TTTCTACGAAGAAGAAAACGATTCAAACGACAACAGAGAGATCCGTTCCGGGATAATGTC
CTTGCAGCTTTGAATGCAGCTAGCCCTTACGGTCGTCCATACGGTCTTGCAGCAACACAA
CAAGCAGCTATCATGGCAGCATCAATGAATCCATATGCTTACATGAACCCACTGCCTGCA
CATATACCGTTGCTACCTCCGCATGAAATCAACAACAGACAAGCTGCTTTAATGGCTTTT
GGATCATCAAGGTTACCTCAGATGACGACCGAATCATCTGTGTCCATCTTCCCCACCCTT
CCCATGCAATCCAACACTGAGCACGGATGCGAGAATCCAAGCCGCGAACTTCGCTAACGC
TGTTGCTCTTCACTCCGCTAGGGAATCCATTAGAGGGCAGCAACAAGCCAAGAAACTTCC
TCGTAATTCTCCTTTTTCCATCGAATCATTGATCGGAAAGTCCTCCGATTCTGCTCCCAC
AACATCCGAACACCACGGCTCCGGATGTTCTTCTCCTTCCTCCCAAACCTCCGGAAGAGA
GAACCCGGTTTCTCCCGTTTCAAAACTCAACCCCGGATTCGGTCCCTGTATCACTTCGAC
TCCGAAGTACTCCGGATCAGATCGGGAGCATTTTTTCCAAGAAACAGGAAGACGCGAATC
CGAAGTCCGCGAATCTGCAGCGGCTGCTTCCCGAAGAAGTTCAGTTTCACCATCAGACTC
ATTATCCCCTCCCCTGCCGGCTTCACAGCCTTCTTTTCCCGCGTTGGGTAGCCAATTGAA
CCCAATGTTTCCATACAACATGGCGCTAAGTTCTCGTATGTTCCAACAGAACCAATCGTA
TCCACCAAACCCCTCTATCGCGCAATCGGCGCAACAGTTAAACGCACTATCAGCCGCAGG
TTTTCTTCCGTCATTAAACGGCTGGCCTTGTTTTGGCAGAACTTAAACAAAAAAATGCAA
TTTTACGCCAAAACCTCCACAGAAGTGGCAGCTGTGAAACCTGGTACATTTCTAAGCAAT
CATAAGCTTTATGTTGCTTACTACACTTCACTCCTTTAGTTATTAAACCGTATATACTTC
AGCGTGTTTAAATGCGACTCTAATTGGACCCATTAGCGTACAATGCAACACCACCATATT
GAAAATTATATTCCAAACATAATACACTGCCATTTATACTGAGATTATGTATTATATGCA
GTACGCATTCCGCAATTACTATACCACACTGTCCATACACAATCTCAGACCGTGGTTGTA
TCTATTTTAAGCATGACACAATTTTACGTTGTTTTCGTTTTTTTTGACTTTTGTGTTTTT
GTTCCGACAAATTAAAATTCTAAACTAAAAAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[230-339] 8.9E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[242-332] 1.9E-60 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[243-338] 2.09E-39 |
| Pfam |
Fork_head_dom (IPR001766) - T[244-328] 2.4E-37 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[244-338] 39.54 |
| CDD |
Fork_head_dom (IPR001766) - T[244-321] 9.63948E-52 |
| PRINTS |
Fork_head_dom (IPR001766) - T[244-257] 3.9E-22 - T[265-282] 3.9E-22 - T[288-305] 3.9E-22 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[288-294] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 76.786 % | 200 | 2.25E-59 |
| FOXD3_HUMAN | 75.362 % | 201 | 1.97E-59 |
| FOXD1_HUMAN | 87.778 % | 183 | 1.12E-52 |