- Clone 'cien149139' >
- Transcript 'KH2012:KH.C8.396.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.396.v1.R.nonSL4-1
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
KhC8 [2,622,934 / 2,625,590]
Amino acid sequence
Length: 430
>KH.C8.396.v1.R.nonSL4-1
RFAKCSFIFQHRIRCVMMTVQCCVQYNTSEDKSDHKRFMMNRIESHGASRDNVIGSAYPQ
QQADAILQNWKSSAAGPTRNKHRDGESRSPVPGKPYQRPDVTKSSPNEMSAIECMRNAVQ
QMQEKVQASAAKTTQHSALNDTYVDVTSLSSPATLVRESFRQNWLPKSPMVDERSSSPVS
SEGNPPARCASLSGEDETREKDEELRKIGEEMEEYSNESKKNVKPPYSYIALITMSILQS
PDKKLTLSGICDFIMNRFPYYKEKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTM
DPEAEDMFDNGSFLRRRKRFKRQQRDPFRDNVLAALNAASPYGRPYGLAATQQAAIMAAS
MNPYAYMNPLPAHIPLLPPHEINNRQAALMAFGSSRLPQMTTESSVSIFPTLPMQSNTEH
GCENPSRELR
Nucleotide sequence
Length: 2,290
>KH2012:KH.C8.396.v1.R.nonSL4-1
CGCGTTTTGCAAAGTGCTCGTTCATATTTCAGCATCGAATCCGTTGTGTGATGATGACAG
TGCAGTGTTGTGTGCAATATAATACAAGCGAGGATAAGAGTGATCATAAACGTTTCATGA
TGAATCGTATTGAATCTCACGGAGCATCACGAGATAATGTCATCGGTTCGGCCTACCCTC
AACAACAAGCAGACGCCATTTTGCAAAACTGGAAATCATCGGCGGCAGGTCCGACTCGAA
ACAAACATCGTGACGGGGAATCAAGGTCGCCGGTCCCAGGCAAACCTTACCAAAGACCCG
ATGTCACAAAGTCATCACCAAATGAGATGTCAGCCATAGAATGCATGAGAAACGCAGTTC
AACAGATGCAGGAAAAAGTTCAAGCTTCAGCGGCAAAAACAACTCAACATTCAGCTTTGA
ACGATACCTACGTAGACGTGACATCATTATCGTCACCAGCCACCCTTGTACGAGAGTCGT
TTCGCCAAAACTGGTTGCCGAAATCACCGATGGTGGACGAACGATCTTCGTCGCCTGTGT
CGTCAGAGGGAAACCCCCCTGCCCGCTGTGCGTCATTAAGCGGCGAGGACGAGACGAGAG
AGAAAGATGAAGAATTAAGGAAGATCGGAGAAGAAATGGAAGAATATTCGAACGAATCAA
AGAAGAATGTAAAACCTCCGTATTCATACATCGCTCTTATAACAATGTCGATACTTCAGT
CTCCCGATAAGAAACTTACTCTGAGTGGGATTTGCGATTTCATCATGAACCGTTTCCCTT
ATTACAAAGAGAAGTTCCCAGCTTGGCAGAACTCGATACGTCATAACCTTTCACTGAACG
ACTGCTTCGTGAAAATTCCACGCGAGCCTGGTAACCCTGGAAAGGGAAATTACTGGACCA
TGGATCCTGAGGCGGAAGATATGTTCGACAATGGTTCCTTTCTACGAAGAAGAAAACGAT
TCAAACGACAACAGAGAGATCCGTTCCGGGATAATGTCCTTGCAGCTTTGAATGCAGCTA
GCCCTTACGGTCGTCCATACGGTCTTGCAGCAACACAACAAGCAGCTATCATGGCAGCAT
CAATGAATCCATATGCTTACATGAACCCACTGCCTGCACATATACCGTTGCTACCTCCGC
ATGAAATCAACAACAGACAAGCTGCTTTAATGGCTTTTGGATCATCAAGGTTACCTCAGA
TGACGACCGAATCATCTGTGTCCATCTTCCCCACCCTTCCCATGCAATCCAACACTGAGC
ACGGATGCGAGAATCCAAGCCGCGAACTTCGCTAACGCTGTTGCTCTTCACTCCGCTAGG
GAATCCATTAGAGGGCAGCAACAAGCCAAGAAACTTCCTCGTAATTCTCCTTTTTCCATC
GAATCATTGATCGGAAAGTCCTCCGATTCTGCTCCCACAACATCCGAACACCACGGCTCC
GGATGTTCTTCTCCTTCCTCCCAAACCTCCGGAAGAGAGAACCCGGTTTCTCCCGTTTCA
AAACTCAACCCCGGATTCGGTCCCTGTATCACTTCGACTCCGAAGTACTCCGGATCAGAT
CGGGAGCATTTTTTCCAAGAAACAGGAAGACGCGAATCCGAAGTCCGCGAATCTGCAGCG
GCTGCTTCCCGAAGAAGTTCAGTTTCACCATCAGACTCATTATCCCCTCCCCTGCCGGCT
TCACAGCCTTCTTTTCCCGCGTTGGGTAGCCAATTGAACCCAATGTTTCCATACAACATG
GCGCTAAGTTCTCGTATGTTCCAACAGAACCAATCGTATCCACCAAACCCCTCTATCGCG
CAATCGGCGCAACAGTTAAACGCACTATCAGCCGCAGGTTTTCTTCCGTCATTAAACGGC
TGGCCTTGTTTTGGCAGAACTTAAACAAAAAAATGCAATTTTACGCCAAAACCTCCACAG
AAGTGGCAGCTGTGAAACCTGGTACATTTCTAAGCAATCATAAGCTTTATGTTGCTTACT
ACACTTCACTCCTTTAGTTATTAAACCGTATATACTTCAGCGTGTTTAAATGCGACTCTA
ATTGGACCCATTAGCGTACAATGCAACACCACCATATTGAAAATTATATTCCAAACATAA
TACACTGCCATTTATACTGAGATTATGTATTATATGCAGTACGCATTCCGCAATTACTAT
ACCACACTGTCCATACACAATCTCAGACCGTGGTTGTATCTATTTTAAGCATGACACAAT
TTTACGTTGTTTTCGTTTTTTTTGACTTTTGTGTTTTTGTTCCGACAAATTAAAATTCTA
AACTAAAAAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[210-319] 8.2E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[222-312] 1.9E-60 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[223-318] 1.9E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[224-318] 39.54 |
| Pfam |
Fork_head_dom (IPR001766) - T[224-308] 2.2E-37 |
| PRINTS |
Fork_head_dom (IPR001766) - T[224-237] 3.5E-22 - T[245-262] 3.5E-22 - T[268-285] 3.5E-22 |
| CDD |
Fork_head_dom (IPR001766) - T[224-301] 9.26606E-52 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[268-274] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 76.786 % | 199 | 2.06E-59 |
| FOXD3_HUMAN | 75.362 % | 201 | 1.72E-59 |
| FOXD1_HUMAN | 87.778 % | 182 | 9.9E-53 |