- Transcript 'KH2012:KH.C11.148.v2...' >
- Transcript 'KH2012:KH.C8.447.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.447.v1.A.SL1-1
Possible name(s)
HDGFL2; HDGFL3; PSIP1
Gene model
Location
KhC8 [6,307,738 / 6,309,616]
Amino acid sequence
Length: 485
>KH.C8.447.v1.A.SL1-1
TKMPKKSGKNSMQYNAGDLIFAKMKGYPHWPARIDDLPEGAVKPPARKYPIFFFGTHETG
FLAAHEVYPYEDYKEKYGHPRPRPFFNDGLWEIENDPTVMFRGRGSAVVEDKVEGEEEAQ
SDEEPQGAEEETAAVEEDFDDEDEESSDNESSADEYVAPDAGVMVKPSKKKKIRSESPED
SGSDASDVEAPPPKRMKKEKKKSDKPRKSDSKPKKSSKKVKPLPTELSDGLSSSDAESGE
DIVSSWKKKDAERKKKQEMETMKRIDEENKKMKEIEKSARKKPRETEEESSSKKKSSKKH
SKERKRSRSEEKKKSKQEKKRHSKPEAPKPVKRKVTKTPSSSENEEEIEEVKEDASPVAE
VSAVTGELQPQQQMEIYETKLKTALTVENPDITKALAILDQIDQIPITAALLKKCQSLVT
TVKKIRRYKASQKIMDKSDKVYHRFKLVFTGLENGAAVTAAAVNAGTKDKEPAAADENTN
TEPPP
Nucleotide sequence
Length: 1,878
>KH2012:KH.C8.447.v1.A.SL1-1
AGTTTGGTAGTAAATACGTTGTCGTTTACTAATGAACTAAAATGCCAAAGAAATCGGGTA
AAAACTCAATGCAATATAATGCTGGGGATCTTATATTCGCAAAAATGAAGGGCTACCCCC
ACTGGCCAGCCCGTATAGACGATTTACCAGAAGGGGCTGTTAAACCACCCGCAAGAAAAT
ATCCAATATTTTTCTTCGGGACTCATGAAACGGGGTTTTTAGCAGCGCATGAGGTTTACC
CGTATGAGGATTATAAGGAGAAGTATGGACACCCAAGGCCTAGGCCATTCTTCAATGACG
GGCTTTGGGAAATTGAAAACGATCCGACCGTGATGTTCCGTGGACGTGGGAGCGCTGTGG
TAGAGGATAAAGTGGAAGGGGAAGAAGAAGCTCAGAGTGATGAGGAACCTCAAGGAGCAG
AGGAAGAGACGGCGGCCGTGGAGGAAGATTTTGATGACGAAGATGAAGAAAGTTCCGATA
ACGAGTCAAGCGCGGATGAATATGTTGCTCCAGATGCCGGGGTGATGGTTAAGCCCTCTA
AGAAGAAAAAGATCCGGAGCGAGAGTCCGGAGGATAGTGGGTCCGATGCTTCAGATGTGG
AAGCACCTCCTCCAAAAAGAATGAAGAAAGAGAAGAAAAAGTCGGATAAGCCAAGAAAAT
CTGATTCAAAGCCGAAGAAAAGTTCGAAGAAAGTGAAGCCCCTTCCCACTGAGCTGTCGG
ATGGGTTGAGTAGCTCGGATGCTGAGAGTGGGGAAGATATTGTGTCTTCTTGGAAGAAGA
AGGATGCGGAGCGTAAAAAGAAGCAAGAGATGGAGACAATGAAAAGAATTGACGAGGAGA
ATAAAAAGATGAAAGAAATTGAAAAAAGTGCGAGGAAAAAACCTCGAGAGACTGAAGAGG
AAAGCAGTTCAAAGAAAAAGTCTTCGAAAAAGCATTCTAAAGAGAGAAAGAGGTCGAGAA
GTGAAGAGAAAAAGAAGTCAAAACAGGAGAAGAAACGACACTCGAAACCAGAAGCCCCAA
AGCCAGTTAAACGAAAAGTAACAAAGACCCCAAGTTCGTCTGAAAACGAAGAAGAAATTG
AAGAAGTGAAAGAAGATGCAAGCCCTGTGGCTGAAGTGTCAGCTGTCACTGGTGAATTAC
AACCACAACAGCAGATGGAAATCTACGAAACAAAGCTAAAAACAGCGTTGACCGTTGAGA
ATCCAGATATAACAAAAGCGCTTGCGATTTTAGACCAAATTGACCAGATACCCATAACTG
CTGCTCTGCTTAAGAAATGCCAGTCGCTGGTTACTACTGTGAAAAAGATACGAAGGTACA
AAGCAAGCCAAAAAATCATGGACAAATCGGATAAGGTTTATCACAGATTCAAACTCGTGT
TTACTGGTCTCGAAAACGGAGCTGCAGTCACAGCAGCTGCTGTAAACGCGGGTACCAAGG
ACAAAGAACCAGCTGCTGCAGATGAAAACACAAACACGGAGCCCCCACCTTAATATAATG
CGACTTAACTTGTAATGTATAATCATGGTGCCCATGTACTTGTACATGGTGTGATTTTAT
GCCACCCCAGTAAATTAGTTGAGTAATTAATATTCTATTCACTTTCAAATCAGGTAAGTA
TTTTAAATTTGTTTTACCATTTTATTTTACTGCCTCAGTGTGTTTGGACAACCTACAAAC
AATACAATATTATAAAGTCACCATTTAAATTGGTAAACACTAAAAGATTCACAGATTTAG
TTAAATGTATTTGTGGGTAACGTGTACAAAGTGTAATTAGTGTATTAAGCGTGGCATTCT
CGTTTGTTTCTTGTTTCCAATCTTACAGAGCTTTAGCCTGTAAGTGTCCTTGTTTTTTTA
ATACAGAAATGTACAACA
| CDD |
HDGF-rel_PWWP (IPR035496) - T[12-96] 1.10875E-34 |
| Pfam |
PWWP_dom (IPR000313) - T[14-76] 9.4E-11 |
| SMART |
PWWP_dom (IPR000313) - T[14-71] 1.3E-13 |
| ProSiteProfiles |
PWWP_dom (IPR000313) - T[16-73] 12.488 |
| SUPERFAMILY |
HIVI-bd_sf (IPR036218) - T[371-446] 7.32E-21 |
| Gene3D |
TFIIS/LEDGF_dom_sf (IPR035441) - T[371-463] 2.6E-25 |
| Pfam |
LEDGF_IBD (IPR021567) - T[375-459] 2.6E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDGR3_HUMAN | 58.73 % | 158 | 9.51E-46 |
| PSIP1_HUMAN | 50 % | 160 | 2.1E-43 |
| HDGF_HUMAN | 43.229 % | 140 | 1.08E-38 |