- Transcript 'KH2012:KH.C8.476.v2....'
Transcript Model
Transcript Id
KH2012:KH.C8.476.v2.A.SL2-1
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
KhC8 [3,155,488 / 3,162,633]
Amino acid sequence
Length: 716
>KH.C8.476.v2.A.SL2-1
IRLREGKTENEGRVEIYHGGEWGTICDDDWNIEAANVVCRMLGYDGAWEYLHSGKFGPGE
GDILMDNVQCTGDESIISSCQFNGWKNHDCSHHEDAGVKCNKIRLPGFHRNLQTGDEGLD
FIRLKPPRGHRKRLPQLDGYVEFYHQKKWRKVCSTGWDLNTASVICGQLGFPRAEEITDR
SQYLARARKKHYYWLSNITCIGTENKVSQCKFQNVDISAYNTCPGEPLITRCIPGPKYAR
GNFKKGGKRRKHRKHNVLRQETIRLKVGSAEGEGRLEVMRSGRWGTVCHRGWNLWAANVA
CRELGFGTAKREIINSYFGAGHGPIWLTDLNCRGNETQLSDCQHGYISTSAEGYEDSELT
ECNHEHDAGVACYVPQFNANQRIRLVGGRNPMEGRVEVKIRKRWGAVCSNDWTMKEAMVV
CRQLGLGFALHSLKDVYFFPGTENITEIAMTGIHCKGDELALQFCPSDGRSLSVCGDPHR
SSTPFAGVICTELSPDLMQDIPLLQQSLHLEDRPLHNLYCASEEGCLSPSAAKMDWPYGS
RRLLRFSTRVWNRGRADFRPARSQDQWIWHQCHGHYHSMAEFTHYDILDLNFTKVAEGHK
ASFCLEDSECSPGVSPRFDCDQPGGGVQGIAVGCADNYQYNIDCQWIDISDITAGNYLIR
IRVNPGTLVAESDFGNNEVICNLQYDGSRVWAWNCHIPDDFDPEILIRYYTSEVYP
Nucleotide sequence
Length: 2,199
>KH2012:KH.C8.476.v2.A.SL2-1
ATTCGGCTCCGTGAAGGCAAAACTGAGAACGAGGGTCGTGTTGAGATTTACCACGGAGGG
GAATGGGGAACGATATGTGACGATGATTGGAATATTGAAGCTGCTAACGTTGTGTGTAGG
ATGTTGGGATATGATGGGGCATGGGAGTATTTGCACAGCGGGAAGTTCGGTCCCGGGGAA
GGTGACATATTGATGGATAATGTACAGTGTACCGGCGATGAAAGCATCATATCAAGTTGC
CAATTTAACGGCTGGAAAAACCACGATTGTTCTCACCACGAGGATGCAGGCGTCAAGTGT
AATAAAATAAGATTACCGGGATTTCACCGCAATTTGCAAACTGGGGACGAAGGTCTTGAT
TTTATCCGTCTTAAACCGCCAAGGGGGCACAGAAAACGTCTTCCACAACTAGACGGTTAC
GTAGAGTTTTACCATCAAAAGAAATGGAGGAAAGTTTGCTCAACTGGGTGGGACTTGAAC
ACGGCATCTGTGATTTGTGGACAGCTAGGATTTCCTAGAGCAGAGGAAATTACGGATAGG
AGCCAATATTTAGCCAGGGCAAGAAAAAAGCATTACTATTGGTTGAGCAACATTACATGT
ATAGGCACTGAGAATAAAGTGTCCCAATGCAAGTTTCAAAATGTGGATATAAGTGCATAC
AACACCTGCCCTGGTGAACCACTGATAACAAGATGTATTCCTGGTCCAAAGTACGCAAGA
GGGAATTTCAAAAAAGGAGGAAAAAGAAGAAAACACAGAAAACATAATGTCTTGAGGCAG
GAAACGATCCGATTAAAAGTTGGATCAGCAGAAGGAGAGGGCAGGTTAGAAGTGATGAGG
TCTGGTAGATGGGGAACTGTTTGTCATCGCGGATGGAATTTATGGGCAGCTAATGTCGCA
TGTAGGGAGCTTGGGTTTGGGACGGCTAAGAGGGAAATTATTAATTCATATTTTGGTGCA
GGACATGGTCCAATATGGTTGACCGATTTGAATTGTCGTGGTAACGAGACACAGTTGAGC
GATTGTCAACATGGTTACATATCCACAAGTGCTGAGGGGTATGAGGATTCAGAACTAACA
GAATGCAATCATGAACATGATGCTGGCGTGGCTTGCTATGTTCCACAGTTCAATGCAAAT
CAAAGGATACGGCTGGTTGGAGGGCGTAACCCAATGGAGGGTCGAGTAGAAGTGAAGATA
AGGAAAAGGTGGGGAGCGGTGTGTAGTAATGATTGGACAATGAAAGAGGCAATGGTTGTG
TGTCGACAACTTGGTCTCGGGTTTGCTCTTCATTCTCTAAAGGATGTTTATTTCTTCCCT
GGAACTGAAAACATCACCGAGATTGCAATGACTGGCATCCACTGTAAAGGAGATGAACTA
GCCTTACAGTTTTGTCCAAGTGATGGGCGAAGTTTGTCAGTGTGTGGAGATCCACACCGA
TCCTCAACTCCATTTGCTGGAGTTATTTGCACTGAATTATCCCCTGATCTGATGCAGGAT
ATTCCTCTTCTACAACAATCTCTTCATTTAGAAGATCGACCGCTGCATAACTTGTATTGT
GCATCTGAGGAAGGTTGTCTATCGCCCTCTGCTGCAAAGATGGATTGGCCTTATGGATCT
CGTCGACTCCTCCGTTTCTCAACAAGAGTTTGGAACAGAGGAAGAGCCGACTTCCGACCT
GCGAGGAGCCAGGACCAGTGGATCTGGCATCAGTGCCATGGGCATTACCACAGCATGGCT
GAGTTCACACATTACGATATACTTGATCTTAACTTCACCAAAGTAGCTGAAGGACACAAA
GCAAGCTTCTGTTTGGAAGATAGCGAATGTTCCCCGGGTGTTTCTCCACGTTTTGATTGC
GATCAGCCTGGTGGAGGGGTGCAAGGTATTGCTGTGGGCTGTGCAGATAATTACCAGTAC
AACATAGATTGCCAGTGGATTGACATTTCTGATATTACTGCTGGAAACTACTTAATAAGA
ATTCGTGTCAATCCTGGTACTTTGGTTGCGGAATCCGATTTTGGAAACAACGAGGTTATT
TGTAATTTACAATATGATGGAAGTCGAGTTTGGGCATGGAATTGTCATATACCTGATGAC
TTTGACCCAGAGATATTGATACGTTATTACACATCGGAAGTCTACCCTTAATTCTTTCAT
CTTTTACACTTTGTATTCTTGGAATAAAATTCCTTTGTG
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[1-105] 2.5E-41 - T[128-234] 4.9E-21 - T[256-376] 3.1E-33 - T[377-495] 1.0E-27 |
| SMART |
SRCR-like_dom (IPR017448) - T[1-101] 5.2E-53 - T[122-233] 2.1E-17 - T[263-373] 6.9E-37 - T[383-491] 8.4E-36 |
| PRINTS |
SRCR (IPR001190) - T[1-17] 1.6E-20 - T[20-31] 1.6E-20 - T[35-45] 1.6E-20 - T[66-80] 1.6E-20 - T[89-101] 1.6E-20 |
| ProSiteProfiles |
SRCR (IPR001190) - T[1-101] 31.385 - T[122-233] 17.992 - T[263-373] 29.205 - T[383-491] 26.517 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[1-104] 1.28E-38 - T[137-234] 9.02E-21 - T[262-373] 5.1E-31 - T[381-496] 3.01E-29 |
| Pfam |
SRCR (IPR001190) - T[5-101] 3.1E-31 - T[137-219] 6.3E-19 - T[268-372] 5.5E-25 - T[386-490] 5.8E-22 |
| ProSitePatterns |
SRCR (IPR001190) - T[6-43] . - T[268-305] . - T[388-425] . |
| Pfam |
Lysyl_oxidase (IPR001695) - T[495-697] 3.6E-91 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[504-528] 6.3E-35 - T[549-570] 6.3E-35 - T[571-591] 6.3E-35 - T[621-643] 6.3E-35 - T[644-663] 6.3E-35 - T[664-681] 6.3E-35 - T[682-700] 6.3E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 43.879 % | 618 | 0 |
| LOXL3_HUMAN | 46.508 % | 637 | 0 |
| LOXL4_HUMAN | 44.398 % | 619 | 0 |